AMCG00001159


Basic Information

Item Value
gene id AMCG00001159
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 17297142 ~ 17308586 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001159
ATGATATGGAGGGCTCAGCTTTCGGACAATTCGGTGGAGTACCTGGCCCAAGAGGACCAGAGGGACGGCAGGGTCTACCTGGAATTCCAGGTGTACCGGGTGATCCTGGGCGAGATGGAGTTGGCGTTCCTGGTTTACCTGGCCCTCCCGGCCCTCCTGGACAGATCATCTATCAGACATCAGGAAACCATGAAGAAGCTATTGGAGGTCCAGGTCCTCAGGGAGGTAGTGGAATACCTGGCCAAGCTGGATTCCCGGGTGACAGAGGACCTTCCGGACCTGTTGGGCCTTCTGGGGCTTACGGTCCTCAGGGACCAAAGGGTGACATTGGATTACCAGGCAGACCTggcccccccggccccccaggCCCACCAGGACCCCCAGGACCCCCTGTCGATGTCAATCAGTTCATTGGAGAAAAAGGAGAGCCAGCCGGAGGTTATTATGACCCCAGATTCGGAGCAGTGCAAGGCCCACCAGGACAGCCAGGCATCCCCGGACTACCAGGTCCTAAGGGTGAATCAATTCAAGGGCCCCCTGGTCCTCAGGGCCCACCAGGGACTCCAGGGATTGGATATGATGGTCGTCCAGGAGCTCCAGGACAGCCAGGCCCCCCTGGACCCCCAGGTGCCCCTTCATTGCCTGGGGCCGCCAGACATCGTGACCGTTTTGAGATCTTATGAGACCATGCTGGCCACAGCAAGACGGCTGTCTGAAGGTACTCTCATCTTTGTCCTGGATAAGACCGACCTTTATGTCCGAGTGAGGGATGGATACAGACAAATTCAGGACAATGAAGTGGCTGAGGTACAGCCTCCTCCTGTAGTCCAATACCCGCATGATCCTTCTTTCAACAATGGAGCTGAGCACTTCTACCAGGGTGGCACAGTCCACCAACCAATAGATAACCCTCATCAGCCAGAGCAAGGCTTCGTCCCACACCCCAGTCCTccagagcgagagcgagagccCCCCAGGAGGACTCCATCACAGCCGGACAGCAGATATCCACAACAGCCGGACAGCAGATATCCACAACAGCCGGACAGCAGATATCCACAACAGCCGGACAGCAGATATCCACAACAGCCGGACAGCCGATATCCACAACAGCCGGACAGCCGATATCCACAACAGCCGGACAGCCGATATCCACAACAGCCCGACAGCAGACACCCAACGCAGCCAGAGAGCAGATACCCCAGCTCACCTCCTCGTAGGCCTAACCAGCCTGAAAATACTCCTTCaaatctccacacacacacctcaggACCTGCACTCCATCTGATCGCCCTCAACGCCCCACAAGGTGGCAACATGCGAGGCATTCGTGGGGCCGACTTCCTGTGCTTCCAGCAGGCCCGGGCTGTGGGGCTCACTGGCACCTTCCGTGCCTTCCTCTCGTCCAAGCTGCAGGACCTCTACAGCATAGTGCGGAGAGCCGACAGGAACACCCTGCCCATCGTCAACCTCAGGGATCAAGTGTTGTTCGACAGCTGGGAGTCCCTATTCAGTGGCTCAGAAGGTCAGATGAAAGCCAATGCGCCGCTCTACTCCTTCGATGGCAGAGACATCCTCAGAGACAGTGCATGGCCGGAAAAGATGGTCTGGCATGGCTCGAACACCAAGGGCCACCGGCTGACGGACAATTACTGCGAGACGTGGCGGACGGCAGACCATGCGGTGACGGGCTTCGCCTCCTCCCTGCAGGCGGGCCGTCTCCTCCAGCAGAGGCCCAGCAGCTGCTCTAGTTCCTACATCGTCCTGTGCATTGAGAACAGCTACATCACACAGTCCAAAAAATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001159 True 1806 mRNA 0.58 15 17297142 17308586

Neighbor

gene id symbol gene type direction distance location
AMCG00001158 NA coding upstream 464 17270011 ~ 17296678 (+)
AMCG00001154 NA coding upstream 154155 17125328 ~ 17142987 (+)
AMCG00001153 NA coding upstream 175777 17051725 ~ 17121365 (+)
AMCG00001157 LOC107389370,LOC101174306,LOC103461921 coding upstream 281541 17011862 ~ 17015601 (+)
AMCG00001152 NA coding upstream 304111 16991598 ~ 16993031 (+)
AMCG00001161 pcbp3,pcbp1,LOC108266078,LOC107657516,LOC107660579 coding downstream 76003 17384589 ~ 17398019 (+)
AMCG00001162 LOC107584166,LOC107602160,LOC107657503,LOC107660577,LOC107728914,LOC107714365 coding downstream 112483 17421069 ~ 17421866 (+)
AMCG00001169 NA coding downstream 415662 17724248 ~ 17725586 (+)
AMCG00001170 NA coding downstream 438464 17747050 ~ 17755669 (+)
AMCG00001168 atg9a,LOC107741391,LOC107677585 coding downstream 464359 17772945 ~ 17782621 (+)
G129080 NA non-coding upstream 150073 17144190 ~ 17147069 (+)
G129071 NA non-coding upstream 404781 16889638 ~ 16892361 (+)
G128958 NA non-coding upstream 1234963 16022258 ~ 16062179 (+)
G128941 NA non-coding upstream 1372332 15923032 ~ 15924810 (+)
G128939 NA non-coding upstream 1375103 15921674 ~ 15922039 (+)
G129221 NA non-coding downstream 178806 17487392 ~ 17550791 (+)
G129255 NA non-coding downstream 382921 17691507 ~ 17692526 (+)
G129343 NA non-coding downstream 663423 17972009 ~ 17976936 (+)
G129552 NA non-coding downstream 1488264 18796850 ~ 18802040 (+)
G129597 NA non-coding downstream 1779562 19088148 ~ 19090238 (+)
AMCG00001114 NA other upstream 1833289 15460532 ~ 15463853 (+)
G128823 NA other upstream 1876262 15409112 ~ 15420880 (+)
AMCG00001098 NA other upstream 2112750 15150275 ~ 15184392 (+)
AMCG00001022 NA other upstream 4912100 12288950 ~ 12385042 (+)
AMCG00001002 myo3b other upstream 5285717 11999664 ~ 12011425 (+)
G129365 zgc:162707,LOC107749877,LOC107592986,LOC107668408,LOC107596553 other downstream 714474 18023060 ~ 18044251 (+)
G129453 NA other downstream 1237307 18545893 ~ 18547915 (+)
G129442 NA other downstream 1246565 18555151 ~ 18558174 (+)
AMCG00001203 NA other downstream 1579698 18888284 ~ 18889724 (+)
G129594 bzw1a,LOC108414345,LOC105905677,LOC103358003 other downstream 1734718 19043304 ~ 19142145 (+)

Expression


Co-expression Network