AMCG00001160


Basic Information

Item Value
gene id AMCG00001160
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 17314065 ~ 17320529 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001160
ATGactgaaaaagaagaaatggagaaggaggaggaggaggccccACCGGCAGACCAGGCCAAGGAGCCGCACACCTGGAACTGGTCGGTCATCTACCTGTGTTTCTATGGGTTCATGGTGACCAATGAGATCACTCCCGTGCTCTCCTACTCCTACATGGCTGTTCTGGTGCCCGTGTTCTTGCTGACGGACTATGTGCGCTACAAGCCGGTCCTCATCCTGCAGAGTCTCAGTCACATCTCCATCTGGCTCATCTTGCTCTTGGGCACCAGCCTGCTGCAGATGCAGTTCATGGAGTTCTTCTATGGCATCACTATGGCGGCCCGGGTGGCCTACTCTTCATACATCTTCTCCTTGGTCACGCCAGCCCTGTACCAGAGAGTGGCCAGCTACTCGCGGTCCTCAGTGCTCATGGGAGTGTTCACCAGCTCAGTCCTGGGCCAGCTCTGCTTCTCCGTGGGTGGCGTCGACTACTCCACCCTCTGCAAGATCTCCCTGGGCTTCGTGATCTTTGGCTTATGCCTGTCCATCTGCCTGCCATGGCCTAAGAGCAGCCTGTTCTTCAACAGGGTGGCAAAGGAAAAGGCCGCCTTAGATGAGCTGGACAAGATGAACCCAGGCGGCCCCTTGCCCATCCCTGCGGCGCCGGTGTCGGGCTGGAGGAACTCTGTGTTCATCCAGATGCTGAAGGAGCTCCTGCATGTGGTGAAGATGCCCCAGCTGCGTCTCTGGAGCCTCTGGTGGATCTTCAACTCGGCAGGCTACTACCTGATGGTCTACTATGTTCACATACTTTGGAATGAAGTCTACCCAGGGGTTGAGAACAGAAAAGTTTATAATGGGGGAGTGGATGCGGCCTCGACTCTGCTAGGTGCCATTGTGTCATTCGcagcagggtttgtgaagatcCGCTGGAAGTTATGGTCAGAGCTTGTGATTGGCATTATAACTGGGATCCAGGCCGCCCTGCTGCTGCTCATGACCACCACGTCCAACATCTGGGTGTGCTACGTGGCGTACGCCCTCTTCAGAAGCTCCTACCAGTTCCTTGTGCCTATTGCCATttTCCAGATTGCTTCATCCCTAACAAAAGAACTGTGTGCCTTGGTTTTTGGAGTTAACACTTTTCTAAGCACCATTCTCAAAACCATTATCACAATCATCGTTTCAGACAAGAGAGGCCTGGGCATGGCAGTACACAGCCAGTTTCTGGTTTACTTCGGTTACTTCACGCTGCTGACCATCGCTTACTTCGGAAGTGCGGCCTATGTCATCATAAAGCATTTCCGCAATGAGAGAGGAGACGGCAGTACGGAGGAGAATGGAGCCACCGAGTTGCGTAGTACTCAAACTGACATCCCTGAAGTAGACAGACTGGCCAATGGCTGCAGTGTTAAGGTCTGA

Function

GO: NA

KEGG:

id description
K14609 SLC19A1, RFC1; solute carrier family 19 (folate transporter), member 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001160 True 1404 mRNA 0.54 5 17314065 17320529

Neighbor

gene id symbol gene type direction distance location
AMCG00001155 LOC107586362 coding downstream 313503 16998617 ~ 17000562 (-)
AMCG00001151 NA coding downstream 379489 16894843 ~ 16934576 (-)
AMCG00001150 NA coding downstream 441338 16857154 ~ 16872727 (-)
AMCG00001145 NA coding downstream 914635 16395035 ~ 16399430 (-)
AMCG00001144 arpc2 coding downstream 992329 16311684 ~ 16321736 (-)
AMCG00001164 NA coding upstream 120187 17440716 ~ 17486990 (-)
AMCG00001167 ube2g2 coding upstream 166868 17487397 ~ 17496135 (-)
AMCG00001163 NA coding upstream 202923 17523452 ~ 17537225 (-)
AMCG00001166 LOC103370188,LOC102799206,LOC101480403,LOC102206624,LOC102301787 coding upstream 224054 17544583 ~ 17593861 (-)
AMCG00001172 NA coding upstream 408469 17728998 ~ 17729801 (-)
G129125 NA non-coding downstream 318657 16923711 ~ 16995408 (-)
G129126 NA non-coding downstream 372783 16940667 ~ 16941282 (-)
G129065 NA non-coding downstream 433580 16876311 ~ 16880485 (-)
G129042 NA non-coding downstream 739466 16520181 ~ 16574599 (-)
G129033 NA non-coding downstream 935750 16353435 ~ 16378315 (-)
G129213 NA non-coding upstream 10931 17331460 ~ 17331681 (-)
G129273 NA non-coding upstream 390368 17710897 ~ 17761905 (-)
G129286 NA non-coding upstream 458387 17778916 ~ 17782649 (-)
G129358 NA non-coding upstream 651480 17972009 ~ 17976917 (-)
G129370 NA non-coding upstream 736611 18057140 ~ 18057666 (-)
AMCG00001156 NA other downstream 126435 17126359 ~ 17187630 (-)
AMCG00001127 NA other downstream 1404939 15519616 ~ 15909126 (-)
AMCG00001118 hibch other downstream 1880596 15364067 ~ 15433469 (-)
AMCG00001119 ftcd other downstream 1881735 15409170 ~ 15432330 (-)
G128741 NA other downstream 2133743 15179241 ~ 15180322 (-)
AMCG00001165 LOC100709166,LOC105019893,LOC103392195,LOC107668404 other upstream 193857 17514386 ~ 17521270 (-)
AMCG00001193 NA other upstream 1204204 18524733 ~ 18532689 (-)
AMCG00001196 RPL37A,rpl37a,zgc:171772,rl37a,LOC107564751,LOC107567628 other upstream 1234706 18555235 ~ 18558217 (-)
G129566 NA other upstream 1568236 18888765 ~ 18889757 (-)
AMCG00001251 NA other upstream 3919953 21240482 ~ 21270383 (-)

Expression


Co-expression Network