AMCG00001163


Basic Information

Item Value
gene id AMCG00001163
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 17523452 ~ 17537225 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001163
GGCGGAGGCAGTCAGGTGAGAACAACAGGAAAAGTTTGCAGTTTGGCTGTGAGAGGATTCGCTAATAAAAGTATACGCGGGGGTAACTTATTATATAgggtacttaaaaaaaaaaaaaaaatatatatatatatatagcttacAATATCTGTGAAGGTCTAGTGCCAGTTCCGGACAGTTTCCCTTCCTTTTAAATCTGGTTACTCTTTATCTTAGTCTGTGTGGGGGTATTCGCTGGAGCAATAGGAACAGAGCAAGAAGCCTTGGCGGACACATCCACTACAGACAGAAACGGTGATCATGGCCGGACTGAGGACCGCGGTGGCCCTGGtggtctgtctttctctcatTAACCTGGCCACAGTCTTGTCTCAGACCACGACCCAAGCTCCCGAGATACCCTGTTCTACCTATTCCAACAGCAGTTGTGAGCAGTGTCTGAAGAATGTTAAGTGCCTGTGGTGTAACCTCAATCATCAATGCATCGATTACCCTGTGAGGAGCCTCGTGCCACCCAGTTCTGTGTGCCCCCTGAACTCGGCTCGATGGGGGCTCTGCTGGGTGAACTTCCAGGCATTGATCATCACCATGTCTGTAGTAGCGGGGATCATTCTTATATCCATTatcatctgctgctgctgctgttgcaaGTGTGAAAAAGGGGGTCTTGCTAAGATGGATGCGAAAATGACGCGCCAGTCTGAGCAGAGGAAGGTGCGCCAGGCGGAGAGGAAAGTTGAAATGCAGATGAGGCACGATGAGATCAGGCAGAAGTATGGTTTGACAAAGGATAACCCTTACTCCAAATTTGAGAACAATTAAACTGCATTACTTCCCAAGAGGATCCTATGTAGAGCTAAACTTTTATTCCATGGTTGTACAATCCCCCAAACTCTACtgacttcattatttttctcttgttaaacagaataggaaaaataagccaaatatcacattatattaaatattataactgTTTTTGGCGATGCTAAATCTACCATATAACTTTATGCATATGTATTGACTCATATATATAACTAACTGTTAGTTTAAATAGAGATTGGCTTGACTGTTGACTTGAGTTAAAGATATATTTGCCTAGAGGTGTGATACTGACCTTGTTCAATTTATTAGAGATCCCATTCGTAAAGCTGCTTTTATATGTCACTGCTAATTTGGTCTCCCCAGCTGTTTTGTATAGATGTACataactgtatttttaccaTCAAATTCTGAAATCTATCTGATCAAATATATGACTTGATTGAAAAATACTAATGTTTAACAAGAGAATAAACTGATGTCACTGTCACTAGTGGCTTTCCTTTGTAGTACCAgcaaatgatcaaatatttttgtgtgctgcaaaaaaaaaattcccgCCGTGACACAGACTTTGAGACATTGCTCTTGTAAAGGTCTTGTAACAGGTTTATGTGCATGAAAGACATCCttgaactttaaaataaaagttactgTTTCATAGTCTTCTCTAGTAAAGGTGTTTTAGTTACAGAAATAGTGGCAAAATCTGTATGAAAACAATTCTGATATATACAATCTGATAATCCATGTAAAACCTGCATTTTTATCAATCCTCCACTTAACAAAATTATAAAGTATTTGAAAGCGTTTAGATGTATTTTTCCTTGGAAGTAAACTgatcaatcattttattttttattctttacataTTTTAGTAAAGCTCATTCTGAACTAGATTGGACATGTTGCCTTTTAATATCCCTAATCTAAATCCCCTTTGTTCCATTCCATTTGACAAACCAATGATGACATAGTGGAAATTGAGATATTAATACTTGTCATTCCATGCAAGACTGCTCAGTGAGACCTGTTTTCATATTTCCTATGCAGCAACTGAAaccatttgaaaatatgaagaatGCTGAAATGCTTTAATATGCGGTACTTGATTGATTAACGTTTATTTAGCCAATCAGTTATTTCGTAGTTCTGCCAATATTGCCCGTAACTCTTCTGTGAGGCAAATATTATTGGGCGGACACTAAATAGTTAGTCTGTGACAATATATGAACTCCAAGTAGGTTGCCTATGCCACAGAAATGACAGGAACTATCAGATTTACACTATTAAAACACTCTGCTGAATTACAGCCAGGCTGCACAGCTCAAGGTGCTTCTGGTCACTTCCTTTAAGTGACTTTCCTACATTGAGCTCCGTCACTATTTAATTGATAGTCACTCATTCCTGCTGTTGAATGACTAGTAAGCTGAAATAGAGGATGCTTTCTTTGCTGCCTCATGAGAAGGTGCTAAACCGTGTAATCTTTTATCATTTACAAAGCATCTCTGCACTGACAGTTTTGTTAAAGTTTGtgctatatatttatgtaaagtCTTGCTTTTTGGTTGTggcctaattaaaaaaaaaacaaaaaaaatgtgatattcACATAATatccaatacataaataaataacatgatatTCATACTGTAAAAGTCTGTCCTGGCGTTTTCTCACAacccacatttaaaaatgtaaaaatgaatatacattttccatccATTAAGACAGCAGCGTggttaacacaaaaataaactccAGATGTTACCCAAGTCTGCATGCATATGCTTTTCATGTAATAATGAACCTGTCTGACTGTCACTCTGACTTTAAGAGTAAATAATACTGACAagacttgttttttgttattaatttctgCTTCAGTGAAGTATTATCacattctcattattattattattattatcacaaatattattatatagcaTTACACTCCTTATTCtgataaaaaatgcattgcCTTCTGTTTAGGGCACTGAGtttcatattttctaaaatCATCTTTGATAGGCAAATCTGAGCatgcatttaacaaaatgttaaacaaaatgttatgtCATAACTGTATGTCATACTTGTATATTCACTGTACAGAGGTGATTGTTCTACTTAAAGTGACAAATTTAAGTAGTTTTtttcaatgtgatttttaaatattttcacttcATCTAGGAAACAAACTTTGTTGTTCAAATAAAGTgacaatattgaatattgaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001163 True 3063 mRNA 0.36 7 17523452 17537225

Neighbor

gene id symbol gene type direction distance location
AMCG00001167 ube2g2 coding downstream 27317 17487397 ~ 17496135 (-)
AMCG00001164 NA coding downstream 36462 17440716 ~ 17486990 (-)
AMCG00001160 NA coding downstream 202923 17314065 ~ 17320529 (-)
AMCG00001155 LOC107586362 coding downstream 522890 16998617 ~ 17000562 (-)
AMCG00001151 NA coding downstream 588876 16894843 ~ 16934576 (-)
AMCG00001166 LOC103370188,LOC102799206,LOC101480403,LOC102206624,LOC102301787 coding upstream 7358 17544583 ~ 17593861 (-)
AMCG00001172 NA coding upstream 191773 17728998 ~ 17729801 (-)
AMCG00001171 NA coding upstream 219853 17757078 ~ 17768452 (-)
AMCG00001176 NA coding upstream 269008 17806233 ~ 17856789 (-)
AMCG00001179 tmem41a,LOC101174769 coding upstream 440612 17977837 ~ 17989616 (-)
G129213 NA non-coding downstream 191771 17331460 ~ 17331681 (-)
G129125 NA non-coding downstream 528044 16923711 ~ 16995408 (-)
G129126 NA non-coding downstream 582170 16940667 ~ 16941282 (-)
G129065 NA non-coding downstream 642967 16876311 ~ 16880485 (-)
G129042 NA non-coding downstream 948853 16520181 ~ 16574599 (-)
G129273 NA non-coding upstream 173672 17710897 ~ 17761905 (-)
G129286 NA non-coding upstream 241691 17778916 ~ 17782649 (-)
G129358 NA non-coding upstream 434784 17972009 ~ 17976917 (-)
G129370 NA non-coding upstream 519915 18057140 ~ 18057666 (-)
G129394 NA non-coding upstream 703231 18240456 ~ 18265272 (-)
AMCG00001165 LOC100709166,LOC105019893,LOC103392195,LOC107668404 other downstream 2182 17514386 ~ 17521270 (-)
AMCG00001156 NA other downstream 335822 17126359 ~ 17187630 (-)
AMCG00001127 NA other downstream 1614326 15519616 ~ 15909126 (-)
AMCG00001118 hibch other downstream 2089983 15364067 ~ 15433469 (-)
AMCG00001119 ftcd other downstream 2091122 15409170 ~ 15432330 (-)
AMCG00001193 NA other upstream 987508 18524733 ~ 18532689 (-)
AMCG00001196 RPL37A,rpl37a,zgc:171772,rl37a,LOC107564751,LOC107567628 other upstream 1018010 18555235 ~ 18558217 (-)
G129566 NA other upstream 1351540 18888765 ~ 18889757 (-)
AMCG00001251 NA other upstream 3703257 21240482 ~ 21270383 (-)
AMCG00001264 NA other upstream 4070612 21607837 ~ 21648508 (-)

Expression


Co-expression Network