AMCG00001166 (LOC103370188,LOC102799206,LOC101480403,LOC102206624,LOC102301787)


Basic Information

Item Value
gene id AMCG00001166
gene name LOC103370188,LOC102799206,LOC101480403,LOC102206624,LOC102301787
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 17544583 ~ 17593861 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001166
CACATATCAAAGCAGTGTCCTGTCCCTGACGTGCTgtcatctgtgtctgtgttgcaggtGTTCAGGCTGGAGAAGGGCACGGTGTCAAGGGAGAAGGTGTTCCCCATGCACCAGAGCAGCATGGAGGGCGTGGAGGACATGTCCACTCTGTCCGAGCTCCACGAGGCCGCCATCATGCACAACCTCTACCTGCGCTACCAAAAGGACAACATTTATACCAATATCGGCTCCATCCTGGCCGCAGTGAACCCCTATAAACCGATCAGTGGGCTGTACGATGCCTCTGCCGTGGACCTGTACAGCCAGCACCACCTGGGTGAACTGCCCCCCCACATCTTTGCGGTGGCCAATGAGTGCTACCGCTGCCTGTGGAAGAGACACGACAGCCAGTGCGTCCTCATCAGTGGGGAGAGTGGCGCTGGAAAGACGGAGAGCACAAAACTGCTGCTGAAGTTCCTGTCGGTCATGAGCCAAAACTCTTCTGGGATCCCTGCCTCCGAAAAATCCACCCGTGTGGAGGAGGCCATCATCCAGAGCAGTCCCATCATGGAGGCCTTAGGAAATGCCAAGACTGTCTACAACAACAACTCGAGCCGCTTTGGGAAGTTCATTCAGCTGCATTTCTCTCAGAACGGGAACATCCAGGGAGGCTGTATCATCGACTGTATCCTTCTGTATTGCAACATAGAAAATAACTTGAACCGGGTGGTGAGACAGAATCCCGGCGAGAGGAACTATCACATCTTCTATGCACTGCTGGCCGGCGCTGATGAGGAACACAGAGAGCTGTATTTCCTGTCGGAGCCTGAATCGTACCACTATCTAAGCCAGTCAGGTTGTGTGAAGGACAAGAGCCTGGACGACAAGCAGCTCTTCAACAGCGTCATGGAAGCTCTGAAGGTGATGGAGTTCAGTGAGGAGGAGATCAGGGACGTATTCAAGCTGCTCTCGGGGGTGTTGCAGATGGGCAACATTGAGTTCATGACTGCAGGAGGGGCGCAGATCACCACCAAAGCAGTGATCAGCAACGTGTGCGAGCTGCTGGGCCTGGACTCCTTCCAGCTGTCCGAAGTTCTGACCCAGAGATCCATGATCCTGCGGGGGGAGGAGATCTGCTCTCCGCTCACCGTGGAGCAGGCCGAGGACTCCAGGGACTCTATGGCCATGGCACTCTACTCCCAATGTTTCTCCTGGATCATCATGAAGATCAACCACAAGGTCAAAGGGAAGGACAACTTCAAGTCCATAGGGATCCTGGACATTTTTGGATTTGAGAACTTTGAGACCTCAGCTCTTGTCTTCTTATGCAGGGAGGGAATCCACTGGGAAGCCATTGACTGGATGGACAACGCTGAGTGTCTCGATCTCATTGAGAAGAAACTGGGCATGCTGGCCCTTATAAACGAAGAGAGCAGGTTTCCTAAAGGTACAGACTACACTTTACTGGAGAAGCTCCACAGCCGCCATGCAACCAACCCCTACTACGTGAAGCCACGGGTGGCAGATCACCAGTTTGGGATCAAACACTACGCCGGAGAGGTCCTCTATGACGTGAAAGGGATTTTGGAGAAAAACAGAGACACGTTCAGAGATGATATCTTGAACATGTTGAAAGACAGCAGGCTGGATTTCATCTATGACCTATTTGAGCGAGTGGGCAGCAGGAACAGCGAAGAGACGTTGAAGATGGGCACTGCCAGGCGCAAACCCACCGTCAGCTCCCAGTTTAGGGACTCACTTCACTCCCTAATGGCTACGCTGAGTGCATCCAACCCCTTCTTTGTCCGCTGCCTCAAACCCAACATGGATAAGACTGCCAATAAATTCAACCCTGAAGTGGTTCTGAACCAACTGCGGTATTCCGGGATGCTGGAAACGGTGAAGATTCGTCGGGCTGGGTTCCCTGTGCGTCGGCAGTTTGGCGACTTCTACAGCAGAtacaaaatgttacagaagGGAATAAACACCACTCAGGATGACAAGCAGAAATGCACTGACCTGCTGAAAGTGTATGATGGCAACAAAAGGGAGTGGCAGCTTGGGAAGACAAAGGTGTTCCTGAAGGAAGCACTGGAGCAGCGGCTGGAGAAGGAGCGGGAGGAAGTGCGGAGGAAGGCTGGCATGGTGATCCGAGCCCACATCCTGAGCTATGTGGCAAGGAAGCACTATAAGAAGGTCCTGGCCAGCACCATCACCATCCAGAAGAACTACCGAGCTCATTTCTGGAGGCAAGGGTTCCTGCGACTGCGCTCCGCCGCCGTGGTCTTCCAAAAGCACCGGAGAGGCCAGCTGGCCCGGGGCCTGTTCCAGCACATCCGTGAGGAGAAAcgaaggagagaggaggaagaggagaggagacggagagaggaggaggaagagaggaggcGAGTAGAGGAAGAAGCCGCCGTGGAGAGAAAgaggctggaggaggaggagctgaggaggaaggaggaagaggagaagctCCGGATACTACAGGAAGAGGCTGAGCTGAAGAGACAACAGGAAAAGGAGGAGCTGAGGGCCCAGCAGGAGTTACAGCAGAAAACCAAAGACCAAGCCAAGACACAGGAGGAGGAAAGTGAGAGCAGAGAGATGGAGCAACTGGGATCTGAGCTGCTTCCTCCAAAGAGAGAGCAGGCGTCCCCCCGCACACCGAGCCCCTGTGTGGTGGAAGAGGAGAGCCGTCAGATGGAGAAGATCCTGCGCCTGGAGCGGGAGATTGAGCGGCTCCAAAAGCAGCGTGAGGAGGGTGTGTCGCTGCTGTGCGAGACCTCGAGGGTAGAGCTGCAGATGCGGCGCGATGCTGAGATCCAGCGGCTGGAGAAGGAAGCCTCACAGGTGGCCCAGGAGTTCCTGGAGCTGCTGGACTTCGGGGGCCTGGAGCGCTCCCTCTCCAGCGAGGAGAACCTCAACGAGCCCTTGGATACCACGGCCCCCCTGGCTGAGGAAGAGGTGGACGAGGGGTTCCATGCCGAAGAAGAGAACATCCCCATGCCTGATTTCCCAGCTCTGGGGGAGGATATCTTTGCCAacctccctcccccaccccctgatCTTATCCTCCCAGAGGGACCCGAGGACTTACCCCCTCCAGCCCCCGTGGACCTTCCCAACACCTCAGAACCTTGCCCCCCTCCACCTTCTCCACCACCGCCCCCCCCTGCCGTCATTGAGGACGACGGCAGTGACTACCAAAGCATCGACCAGACCATCCCCGAGAGCCTGCCTGACTCAGAGGAGCCCATCTACAGCATTCCCCCAGATATGGAGTCTGATTATGACCACGATGATTTAGAAGAGGCCCTGGCCAGCTCAGGGGACGCGGGCAGCAACAATGATGGCCACTTGACCGACGAAGAGGTTCTCCGCAAGTCTACCTGCACCTACAACAGCCTGGACTCGTACCGGGGCAGCTCAGACTCGTTCATTGACAGCGATGATGACAACGATGGCTACATTGACACAGACGAGGAGGTGTCCAATGGCAGAGTGAGCCTCTTCAATGGCACAGGCCCTCCATACTTCCACAGCTACCTCTACATGAAGGGTGGTCTGATGATCCCGTGGCGACGGCGCTGGTGTGTTCTGAAGGACGAGACCTTCATGTGGTTCAGGGCCAAGCAGGAGGCCCTGAAGTCCGGCTGGCTGTATAAGAAGGGCGGGGGCCTATCCACGCTCTCACGGCGCAACTGGAAGATGCGCTGGTTCGTGCTGCGGGAGTCCAAGCTCATGTACTTTGAGAACGACAGCGAGGAGAAGCATAAGGGCACCATCGACATCCGGGTGGCCAAGGAGATTGTTGACAACCACGAGAAGGAGAACGCCCTGGACATTGTGACCGACGAGAGGACCTATCACATTGTGGCCGAGTCACCAGAGGATGCCAGTGGCTGGTTCAATGTGCTGAGCCGGGTCCACAGCGCCACCGCAGAGCAGCTCCTAGAGATGCAGGACGAGCAGGCCAACCCCAAGAATGCTGTGGGGACGCTGGATGTTGGATTGATTGACTCTGTTTGTGCCTCGGACAATCCAGACAGGCCCAACTCCTTTGTGATCATCACTGCGAACCGAGTGATCCACTGCAACACAGACACCCCCGAGGAGATGCACCACTGGATCAGCCTGCTGCAGAAGCCCAAGGGAGACTCAAAGATTGACGGCCAGGAGTTCTTAGTGCGAGGCTGGCTCCACAAGGAGGTGAAGTCTGGGGGGAAGAGCACCTCTCTGAAGCTGAAGAAGCGTTGGTTTGTGCTCACCAACAACTCCCTGGACTACTACAAATCCTCCGAGCGCAGTGCCTCCAAGCTGGGCACGCTGGTCCTCAATAGCCTCTGCTCCGTGGGGCAGCCCGACGAAAAGATCTTCAAGGAAACCGGTTACTGGAACATCATCGTCCATGGGCGCAAGCACTCCTACCGCCTCTACACCAAGATGCTGAATGAAGCGATGAGGTGGGCCAACGCAATACAGGGCGTCATCGACAACAAGGTCCCCATCGAGACGCCAACACAGCAGCTGATTAGGGATATCAAGGCAGTGCAGGTTCAAAAGGAGAAGGGTTATGCCAGCTTGCAGGATGAGGCAGTGAAGATGTTCAACTCGCTGCAGGAGATGGAGACGGTGTTAGACCCTGTGCCCATCATCCAGGGCATCCTGCAGACCTGCCAGGACCTGAGGCCGCTGCGAGACGAGGTCTACTGCCAGCTCATCAAGCAGACGAACCACGTGCCCCAGCCCAACAGCCCCGCCAACCGTGCCCATTGGCACCTCCTCACCTGCATGAGCTGCACCTTCCTGCCCAGCCGCGGCATCTTGCGCTATCTCAAGTTTCACCTGAAGAGGATTAAGGAGCAGTTCTCGGGGACGGAGATTGAGAAGTATGCCCACTTCATCGGAGAGTCCCTGAAGAAGACCAAGACGAGGGAGTTTGTGCCCTCCCAGGAAGAGATTGCGGCGCTGCTCACCAGAAAGGAGATGACCACCACTGTGTACTGCCATGGGGGGGGCTCCTGCAAGATCTCCATCAACTCCCACACCACCGCTGGGGAGGTGGTAGAGAAGCTCATCCGAGGTCTGGCTATGGAGGACAGCCGCAACATGTTCGCCCTGTTTGAACACAACAACACCACCGACCGGGCTGTGGAGAGCCGCGTCATCGTGGCAGACGTGCTGGCTAAGTTCGAGAGGCTGGcaggcacagaggaagaggaagaggagggccaatggcagctgtACTTCAAGCTCTACTGCTTTCTGGATGTGGAGAGTGTTCCCAAGGAAGGTGTTGAGTTTGCGTTCATGTTTGAGCAGGCCCACGAGAGCCTGATCAGCGGGCACTTCCCTGCCCCAGAGGAGACCCTCCAGCAGCTGGCTGCCCTGCGGCTGCTGTACCTCCACGGGGAGGTGGGACGGGCTGGCTGGACCCTGGACAACATCTACCCAGTGGGTCGTCTGCGCAGCCGCATCCTGCAGTCCACCAAGTCCAGCGGTGGGGCCGGGGGGAGTGCAGCAGGGCCAGGGGGGCACACCCTGGAGCGCCGCAGGACCAGCTTCCTGGAGGGCACCCTGAGGCGCAGCTTCAAGACGGGCTCCATGAAGAAGCAGCGCATGGAGGAGGAACAGATGCTGGAGATGTGGGTGAAGGAGGAGCTGTCGGCCACCCGCGCCAGTGTGCTGGAGAAGTGGTCAAGGCTCCAGGGCCTTCCCCAGCACCAGGCCATGCTCAAGTACATGGCCATCATCATGGAGTGGCCGGGCTATGGCTCCACACTCTTCGACGTGGAGTGTAAGGAAGGAGGATTCCCTCATGACCTGTGGCTGGGAGTGAGTGCAGAGAACGTCTCTGTTTATAAGAGGGGGGAGCCCAAGCCTCTGGAGACCTTCCCCTATGAGCACATTGTCTTCTTTGGGGCACCCCAGGCCAGCACCTACAAGATCACTGTGGATGAGAGGGAGATGTTCTTTGAGACCCCACAGGTTGGTGAGATCACCAAGATCATGAAAGCCTACATAAACATGATCGTGAAGAAGCGATGCAGTGTCAAATCTGTGTCCAGCCGTGGCAGCACCTGGATCAGGTGATCAGCGTGGCCCAATCATCACGTAGTAACTCCACCGGGAAGGCGTGTGCTTGGCAGCAGGAAGTTGTCATGCAGCCAGAAGGAAAAGCAGTCAGCTGGAAGCTTTGGAAGTGGTGATCTGCTGCTTCACAGGGAAACCAAAATCCAATGAGGGAAAACTGATGTCCTGCCAGATTAAAGGACTGGAATGAACAATACCTTAACCCTGAGAAGACTTCTGCTGTGCTACTCAAGATGTATTCAGATGGCTAGCACATTCTTATATATGCTGTAATTACtaccagtttttgttttcctctttttataCTGTAACGGAAACATTCTCACCAAACAGAGCACAGCACATTAATTAGTCCAGCCTCTTTGTGTTTGCCGCCACACCTCAATGAGTCAAAGAACAATCTTTGCTTGCTTTTCTTCTATTTCATCCTCACATATGCAAATGCCTCTTTTACAAGTGAGTCTTTTGATGTCAGCTCGTGTTTTATGATACCAGGGAACGGAATATCAGTCTGCCTCACATATACTGGCTGACTAGGCTCAGATTCAAAAGGAATTTCTTCGTAGATTTTGGTTGTAGTCATTGTACAGTCTCAGACTCAAGGCCTCAGAATTGCAGAATTGAATCTTAACAGTTGACTAAAACTGGAAAGTGATGTTTCCAAGTATTTCTTGACCATCCATTCAGAAAAcgaatataatatttgttttttaagtccaGCAGCTCTGGTTTTGTGAGAAAAATGAGTCACCTCGCTGCAGTCGATGGGTCAGTGTCAGTTTTGCACAAAATATGGCTATGGTTGTGACAATATTTTGAAACTTTTTGTATACTATTTTCTACAGTATACTATATACTACTACAGCACCCtacttttatataatattaaatataaaacatgtagcCATTTTAGTCAGTATGAATCCATAAAGGAAATGCCCTAGCTGTTTTAAGGATTTTACCTCTTctataaaaaacactgaatttttCAGGTATGGTCAATAGGTGTAGGGAACAATATATCAGCTTTCATGTGAAACTGGAAAGAACCATATTCCGTCCCTAAGTCTTTATGCCTTAAATAGACTTGCTGCTTTCATACAATGCCTTGCTCTTCAGCTTTGAGCCCATTACTGAAGTGGAAAGTGGGTGAAGGTGTACAGACTGGCACAACAAAGTAACTAACCTCAAAGAAGTGTTCTCCATCCAGGCTGTGTGGCCTGATGCCTTCTCTTTTAGTTAGAAGGGAGCCAGGAGTATACCAGTATCCAATCAAGCTAGTATTTTATAGTTGTCAGCCACTGGTATTCAGTGATCTTTCCTGTCTCCAGTACTTGGGCTTTCTCAGTGGAGAAGTGGCAGTTAGCCTATATTGTATTACCAAAATGTTTCACTGCTTCTTAGAAGAGACAATTGAAGGTTTCTTCTACAGAAAAGTGAAAGAGAATTTCAAGGCTTAATCATGGATGCCTTTAACACCAGgctttgaatttgttttaatgttttaaaactagTAAATAATAAGAGTAACCAAGACAACAATTAATTAGACCCCAAATTCAGATTTTCTCcttttacaataaacaaaccaacaataGCAAGAAAAACACCAGAGtaagtcaaataaaaatcaaaagtATGGTATTGAAGTTTATTTCCAATACCAAAACCGTAGGGAACAATTTGTTACCAGGCAaacaaaggttttgttttatttttagtgtaaAGCAAACTGTGCTTTtgaattgggaaaaaaaaaaaaggaatagcATTGAGAACAGACCTCAGTCAGAGTTTGGGGAGGCAGATATAGTCAGGTACTTCTGTTATGGAAGGaagtttttatgtgtttaaagGAGTTGTGGTGTGTCAAGGGAAGGGGCGGGAGGGGAAGtggggtatttatttatatattgctcATGATACTtctaatgcaaagaaaataagggCGGGGGTAGTTTGTGCACTGTGAGCCTGGAAGgtccagattattttttaacctgAGAAGGCCTCTTTAACATGAAAGATATGACACCTAAACTTACTGCAGAATGGCAATACGTCACTCTTGGTGCTGTCTTTTTGggaaatgtgtctgtgtgtaggtTTAATGGTCGCACACATTGTCATAAAAACTAGGCCTCATCCCCAGCACCACCTACCTGTCTCTTACTGCTGTTATGCTGAGGCCTCTGGGAAAGCTGCAGGCAGCCACACCAGAGCTAGAATGTAATCATTTAATATGAacattgtgcttgtttttaagaaaagtcaaagaaaaaatgttttttttttttttattt

Function

NR:

description
PREDICTED: unconventional myosin-X-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001166 True 8387 mRNA 0.52 37 17544583 17593861

Neighbor

gene id symbol gene type direction distance location
AMCG00001163 NA coding downstream 7358 17523452 ~ 17537225 (-)
AMCG00001167 ube2g2 coding downstream 48448 17487397 ~ 17496135 (-)
AMCG00001164 NA coding downstream 57593 17440716 ~ 17486990 (-)
AMCG00001160 NA coding downstream 224054 17314065 ~ 17320529 (-)
AMCG00001155 LOC107586362 coding downstream 544021 16998617 ~ 17000562 (-)
AMCG00001172 NA coding upstream 135137 17728998 ~ 17729801 (-)
AMCG00001171 NA coding upstream 163217 17757078 ~ 17768452 (-)
AMCG00001176 NA coding upstream 212372 17806233 ~ 17856789 (-)
AMCG00001179 tmem41a,LOC101174769 coding upstream 383976 17977837 ~ 17989616 (-)
AMCG00001185 vps8,LOC107699090,LOC107719737,LOC107710204 coding upstream 580022 18173883 ~ 18236780 (-)
G129213 NA non-coding downstream 212902 17331460 ~ 17331681 (-)
G129125 NA non-coding downstream 549175 16923711 ~ 16995408 (-)
G129126 NA non-coding downstream 603301 16940667 ~ 16941282 (-)
G129065 NA non-coding downstream 664098 16876311 ~ 16880485 (-)
G129042 NA non-coding downstream 969984 16520181 ~ 16574599 (-)
G129273 NA non-coding upstream 117036 17710897 ~ 17761905 (-)
G129286 NA non-coding upstream 185055 17778916 ~ 17782649 (-)
G129358 NA non-coding upstream 378148 17972009 ~ 17976917 (-)
G129370 NA non-coding upstream 463279 18057140 ~ 18057666 (-)
G129394 NA non-coding upstream 646595 18240456 ~ 18265272 (-)
AMCG00001165 LOC100709166,LOC105019893,LOC103392195,LOC107668404 other downstream 23313 17514386 ~ 17521270 (-)
AMCG00001156 NA other downstream 356953 17126359 ~ 17187630 (-)
AMCG00001127 NA other downstream 1635457 15519616 ~ 15909126 (-)
AMCG00001118 hibch other downstream 2111114 15364067 ~ 15433469 (-)
AMCG00001193 NA other upstream 930872 18524733 ~ 18532689 (-)
AMCG00001196 RPL37A,rpl37a,zgc:171772,rl37a,LOC107564751,LOC107567628 other upstream 961374 18555235 ~ 18558217 (-)
G129566 NA other upstream 1294904 18888765 ~ 18889757 (-)
AMCG00001251 NA other upstream 3646621 21240482 ~ 21270383 (-)
AMCG00001264 NA other upstream 4013976 21607837 ~ 21648508 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000037_00138481_00163617 MYO10L1, MYO10L3 coding CI01000037 null 138355 ~ 163617 (-)