AMCG00001167 (ube2g2)


Basic Information

Item Value
gene id AMCG00001167
gene name ube2g2
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 17487397 ~ 17496135 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001167
ATGAGATTCACCTGTGAAATGTTCCACCCGAACATCTACCCTGATGGGCGGGTGTGTATCTCCATCCTGCACGCTCCTGGAGACGATCCCATGGGCTATGAGAGCAGCGCTGAGCGGTGGAGTCCAGTCCAGAGTGTGGAGAAGATCCTGCTCTCTGTGGTCAGCATGCTGGCTGAGCCCAATGACGAGAGTGGAGCCAACGTAGATGCATCCAAGATGTGGCGTGAAGACCGAGACCAGTTCTGCAGAATTGCTCAACAGATCGTGCGCAAATCCCTGGGCCTATAATACTCCCTGCATTTCAACTTAACGGACCCtgaaagatttaattttttctttgttacaaAGACGTTTCTGGACACTGAAGAAcagaaggtgaagaagtggCCACTCCCCCCCCATTCCCCCTCTCACACTCCCTTGGACTCTTTGCTGTATGTTATCCACTTCTTTACTTTTCCTGTAGGGTCTGATTTGGAGAGCCCTGACAGTGTTCGTGAAGATCAATAGATTCTGAATCCTTGGTTTGTCCTGTATTACTGCTTTCCCTCTGCCGTTACgacattttattattctagTTTTCTTGTGATCCGTGATATAGGAAGACGTGCTTGGATAATCTTTTACACACAACCGCTCACATAAACATGagcatgattgttttttttgtattatgattattttatctATATAGGAAGGTCTAAATGACACCCACTGGGTTTAGGTgctgcagagaaaaacaacagacgTCTGACAAAAGCCTACATACCCACCAGTGTTATTTAATACAGAACCGTCTGGAACAGTGCTTTTGTATTAAGCTGACCATATCACTGGAAATCAGCAGTCTCCCTTTGGATGTTCAGTCCAGCATTTCTCTCTTTTGGTTTTTGCACAAAGGGCTTTCTTTTGTATGGCTACACAATTGCCTAATGCTCTATGAAGTGTAGAAATCAATTTCACTGTAGGGATGTAAAAGAGAGACCTATCTGGTTACAACTTTCAatcaacaataatataaaatcacattttgaaaaggtggtagtgttaaaatgtagctaaataaaataatacagatagATATATGTAATAAAGCTGATTTATTGTGATTCAAGTCAAATTCAACCACCTGGACTTGAATGAActgaataaaaccaaattaattttgataaaaataagaaaattgaagtagatcaaaatATTGAAGAAGTAATTCAAGCAGATGCAAATCCtttggaagaaatcaaaagagtgAAAATCGGAGGAGTACATTGGGACGAAACAGCTGCCACTGAAACCAAATCTACCTATTTACCTGAAGAGGAAAGTATTTAATCAATGCATACAATCAGTGCTCATTAATGAGTGTGAGACCTGGCCACTAATCGCAAAAATTACATAGAGACTGcggacaacacaaagaagcattgAAAGATGGATGCTTGGAATAATGAGCagagacaaataaacaaatgaatttGAGAATAAACAAACCTATGTTACAtcattgaaagtgaaaatgttaaaatggcaatgggccggacacactgcaagaagatcagaccaaagatggacaaaagaagggatcccaagagatgaaaaaagatctAGAAAGACGAACACATAACAGAGGGGAAGGTGAAATAggatttgctggtgtgacctggaaagaGACTCTGTAGTTCGAAACAACTGGAAATACctggctgatgatgatgatgatgatgatatagtataatatatatgtttagtaaatagaaatgagaaaaaattCTGATGGTTTTGAGAGAAAATCATCAGAATACttgtatttttctgaaatattgtagttacatattttaatagacTTTGTGCTggcttaatttgaaatatttaatttagagcACACTAGCTGACATAATTAACATGATCTTTGgtgaaatttaaaatacaaaaaatatagaatttgctttttggttattttttatttccttatttaatgGATGCTGTTCGAGCAGCAGTGCATTGTGGATCATCACATTCTCATAAGTGTTTTTCAAGCAGCAGGGTAAGATTTTAGATGAAGTGCCCTTACCTGAGAACAATTTCCTCTTAAATGTTAAAGTAAAGTTAATTACGTTTCCTTATTATGAAATTCAGATTCAGGCCTGCGAACATAATTGTAATTGCAGACGTGTGTGCATTCATTAGCTGAATTCATGTTGAGATGATTAAAATCCTTTGTCATGTCAAATTAATTGGTTCCAGATTCATGCAATTCTCTAGAGAAAGTTATTAAATTGATAACACATTAACTACAAATCTTGCTTAGTAGTGATTCTAACACTAGATTTGAAATCATCTCTGGTTTCCTTCCTAATAATCTGGCCTTGCAAGCAGCTAAAGAGCGCATCTCAGTGGGAATGTTTAGCTGCCAAATATAAGGGGATCTTATTGCAAAAAAGACAGTTACATTACTCAAATATTAACTCCAGTCTCCCTTGGTCCATAAGCTATGGCCCCTCGAGCTTAGAATAGGGTATTTAACAAGgcatattgtaataaaatatatatatatatataaataattttactgGTTTGCAACTTTGTTTCACTGCAGctataaaaatagaaacccTGAAAGAACTGAACGAATTTGGGCAATAAgatccaaaacaaatacatttataactggatttttttttttttttctgatgcaGATAAGGATTTGTAAGCTTTTTTTggtagatctttttttttttctctttgaataTTTTGGAGGttatcttgattgttttctgaGGATTCAACCATGATTGCTGATGTATGCCTGTGTTTCATAAAACAAACCCAGCAGTGGATAGATAAAAGACATCCCTGCTGTTCTGTTCTGATGTGATAAGATGTCCTATCTCAAACTCCCGTTTACAGCCTGACTATCACTGTGCTGTTTCAGCTTACCAGTCATGTGAGACTCCAGACTCAAGACAAGGTTTCTCAAGACGAGGTAAAGTGGTTCTGGAAACTCTAATGCTACATACCAGGGTAGTGACACCGTAGTAAAATATTTAGGGTGAAAGGGCCCATGCATTATCCTAACAGTCGACAATCTCCTAGGCCTAgaactctttttattttttatgcccAGTCATTGTAAACCATATGTCTCTGCCCTGCCTCGAAATTCGTAGTACGGCCTCAAAATTGGACTCTATTATAATATTTCTATAGGCTACACTTTGGACATTGGGGAAAAAGGCACTACATTGCAAGAAACGCATTAGAACTGTTAACAGCCTTTACTTCTGTTGAGTTGGTGGTCTGATGGTCATTCAGACTTCATGTTTAAATGCTCCTTATATTATGtgactttattattttgaatttggaCAATCTTGGAGAACtgttttttgaatattttccaAGACCGTAATGAATCTGAGGTTACACAGAAAAGCTATGCAATAAAGTGGCTATAAAAAACAACTGCTGGTATTTGTAGATTCATACACATTTCAAGGTTtccaatcatttatttaacGTAGAAGGCTTCTATTAGggtttgaatttgaatgcttACATATCTTTGTACTTTGACAGACTTGTTGCACACTATATCGGAACAACAACTACTGTGCTCTGTTAAAAACatgaagcaatacaaataaatatatgccccctttc

Function

symbol description
ube2g2 Predicted to enable ubiquitin conjugating enzyme activity. Predicted to be involved in protein polyubiquitination and ubiquitin-dependent ERAD pathway. Predicted to be active in cytosol and endoplasmic reticulum. Orthologous to human UBE2G2 (ubiquitin conjugating enzyme E2 G2).

NR:

description
PREDICTED: ubiquitin-conjugating enzyme E2 G2 isoform X1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016881 acid-amino acid ligase activity molecular_function

KEGG:

id description
K04555 UBE2G2, UBC7; ubiquitin-conjugating enzyme E2 G2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001167 True 3663 mRNA 0.37 3 17487397 17496135

Neighbor

gene id symbol gene type direction distance location
AMCG00001164 NA coding downstream 407 17440716 ~ 17486990 (-)
AMCG00001160 NA coding downstream 166868 17314065 ~ 17320529 (-)
AMCG00001155 LOC107586362 coding downstream 486835 16998617 ~ 17000562 (-)
AMCG00001151 NA coding downstream 552821 16894843 ~ 16934576 (-)
AMCG00001150 NA coding downstream 614670 16857154 ~ 16872727 (-)
AMCG00001163 NA coding upstream 27317 17523452 ~ 17537225 (-)
AMCG00001166 LOC103370188,LOC102799206,LOC101480403,LOC102206624,LOC102301787 coding upstream 48448 17544583 ~ 17593861 (-)
AMCG00001172 NA coding upstream 232863 17728998 ~ 17729801 (-)
AMCG00001171 NA coding upstream 260943 17757078 ~ 17768452 (-)
AMCG00001176 NA coding upstream 310098 17806233 ~ 17856789 (-)
G129213 NA non-coding downstream 155716 17331460 ~ 17331681 (-)
G129125 NA non-coding downstream 491989 16923711 ~ 16995408 (-)
G129126 NA non-coding downstream 546115 16940667 ~ 16941282 (-)
G129065 NA non-coding downstream 606912 16876311 ~ 16880485 (-)
G129042 NA non-coding downstream 912798 16520181 ~ 16574599 (-)
G129273 NA non-coding upstream 214762 17710897 ~ 17761905 (-)
G129286 NA non-coding upstream 282781 17778916 ~ 17782649 (-)
G129358 NA non-coding upstream 475874 17972009 ~ 17976917 (-)
G129370 NA non-coding upstream 561005 18057140 ~ 18057666 (-)
G129394 NA non-coding upstream 744321 18240456 ~ 18265272 (-)
AMCG00001156 NA other downstream 299767 17126359 ~ 17187630 (-)
AMCG00001127 NA other downstream 1578271 15519616 ~ 15909126 (-)
AMCG00001118 hibch other downstream 2053928 15364067 ~ 15433469 (-)
AMCG00001119 ftcd other downstream 2055067 15409170 ~ 15432330 (-)
G128741 NA other downstream 2307075 15179241 ~ 15180322 (-)
AMCG00001165 LOC100709166,LOC105019893,LOC103392195,LOC107668404 other upstream 18251 17514386 ~ 17521270 (-)
AMCG00001193 NA other upstream 1028598 18524733 ~ 18532689 (-)
AMCG00001196 RPL37A,rpl37a,zgc:171772,rl37a,LOC107564751,LOC107567628 other upstream 1059100 18555235 ~ 18558217 (-)
G129566 NA other upstream 1392630 18888765 ~ 18889757 (-)
AMCG00001251 NA other upstream 3744347 21240482 ~ 21270383 (-)

Expression


Co-expression Network