AMCG00001206


Basic Information

Item Value
gene id AMCG00001206
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 18791514 ~ 18793991 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001206
ATGAGTCCCGCTAAGCGAACAAGAGACCGAGACGCGCAGGTGCTGGAGGTGCGCTTTGTGGGGGACGGGGATGTCTTGGACCACATCGTGGACAAACAGGAAGGTGGCAAGGTGGCAAAGAATGCCGTCCAAAAGCTGGTGACGCTGAAGAAGCGGCAAGATGAGGAAGCCGAGGAGGGCGAGCAGGACGCTTTCACCCAGAGGGACTATGTGGAGGTCTTGGGCGCCGGGGTGGAAGGAGAGGCTGGGAGCAGGCCGGCCGGGACCGCAGGTGCGGATGTGTTCACATTCCAGGCTGTGAAGCGTTCCAACAAGATGGCTCAGATGgCATCGGAGCTCGCCCGTACCCCTGGAAAGAGTGTCACTTTCAGTACGTCAGACTCGCCTGAACAAGTCACCAGCCCTACCAGAGCAAGCAAGACTGCCAACCTGAAGTCGGACAGCGACAGCGAGTTCTCTCCCTCTGATTCGGAGGAGGACGcggaggagcaggagcaggagaaggTCCCTCAGGCGGAAGCAGAGCCAAAGACACCCAGCAAGGCTCCAGCAGCGGCTCTTTACAAGACACCCGCCAAGAAAAGCAAAAGTGCACCGGAGGTGAGCTCTGGGAGTAAAATGCAAGCTGCAGCATAG

Function

GO:

id name namespace
GO:0090304 nucleic acid metabolic process biological_process
GO:0006139 nucleobase-containing compound metabolic process biological_process
GO:0006725 cellular aromatic compound metabolic process biological_process
GO:1901360 organic cyclic compound metabolic process biological_process
GO:0006259 DNA metabolic process biological_process
GO:0006260 DNA replication biological_process
GO:0006261 DNA-dependent DNA replication biological_process
GO:0046483 heterocycle metabolic process biological_process

KEGG:

id description
ko04110 Cell cycle
ko04111 Cell cycle - yeast
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001206 True 636 mRNA 0.59 5 18791514 18793991

Neighbor

gene id symbol gene type direction distance location
AMCG00001205 orc2,LOC107564577 coding downstream 2057 18786417 ~ 18789457 (-)
AMCG00001200 NA coding downstream 26746 18728264 ~ 18764768 (-)
AMCG00001201 NA coding downstream 75148 18642257 ~ 18716366 (-)
AMCG00001197 LOC107567712 coding downstream 182885 18590657 ~ 18608629 (-)
AMCG00001199 pfklb,pfkl,LOC108444469,LOC107675136,LOC108423917 coding downstream 202679 18564758 ~ 18588835 (-)
AMCG00001204 fam126b coding upstream 10716 18804707 ~ 18840390 (-)
AMCG00001208 NA coding upstream 249966 19043957 ~ 19066500 (-)
AMCG00001211 NA coding upstream 306297 19100288 ~ 19105711 (-)
AMCG00001213 NA coding upstream 313563 19107554 ~ 19121606 (-)
AMCG00001215 bzw1a,LOC108414345,LOC101480137 coding upstream 346679 19140670 ~ 19151279 (-)
G129465 NA non-coding downstream 310558 18477617 ~ 18480956 (-)
G129440 NA non-coding downstream 376404 18413485 ~ 18415110 (-)
G129438 NA non-coding downstream 378081 18412854 ~ 18413433 (-)
G129437 NA non-coding downstream 378764 18410106 ~ 18412750 (-)
G129394 NA non-coding downstream 526242 18240456 ~ 18265272 (-)
G129567 NA non-coding upstream 95953 18889944 ~ 18890146 (-)
G129571 NA non-coding upstream 106520 18900511 ~ 18903646 (-)
G129573 NA non-coding upstream 113153 18907144 ~ 18907641 (-)
G129593 dip2a,LOC108240767 non-coding upstream 245176 19039167 ~ 19041958 (-)
G129621 NA non-coding upstream 282759 19076750 ~ 19083163 (-)
AMCG00001196 RPL37A,rpl37a,zgc:171772,rl37a,LOC107564751,LOC107567628 other downstream 233297 18555235 ~ 18558217 (-)
AMCG00001193 NA other downstream 258825 18524733 ~ 18532689 (-)
AMCG00001165 LOC100709166,LOC105019893,LOC103392195,LOC107668404 other downstream 1270244 17514386 ~ 17521270 (-)
AMCG00001156 NA other downstream 1603884 17126359 ~ 17187630 (-)
AMCG00001127 NA other downstream 2882388 15519616 ~ 15909126 (-)
G129566 NA other upstream 94774 18888765 ~ 18889757 (-)
AMCG00001251 NA other upstream 2446491 21240482 ~ 21270383 (-)
AMCG00001264 NA other upstream 2813846 21607837 ~ 21648508 (-)
G130004 NA other upstream 2995217 21789208 ~ 21822820 (-)
AMCG00001268 NA other upstream 3408055 22202046 ~ 22220416 (-)

Expression


Co-expression Network