AMCG00001232


Basic Information

Item Value
gene id AMCG00001232
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 20503852 ~ 20504824 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001232
ATCTATGGAGGGACCTCCGAACCTGGGCAGACATTGCACACCAGGAAGTGGGATGCCACACATCCTTGCCAAGTGAAACTTACTGACAATATTATTCAGTTTATTGCCAAGGATCTAATGCCACTTTCTGTTGTGGAGAGCACAGCCTTTcataaaatctttcaaaatgcAGAACCACGATTCACCATGCCCAGCAGGAAACATGTGAGTCAGACACTAATCCCACAACTTGCCACAACTGTTAGAGAGCAATTATCTCTGGAGATTCAGAATCCGCTAAATATATATCTAACAATTGATCTATGGTCAAGCAGGGATATGAGGTCCTTCATTGGCATCACAGGTCATTACATCAAGGACTACTCTAAAGAGTTGCATCGTTTTAAGGGTGCACACACTGCTGAGCACATCTTCAGAACATATGAGGAAGCCATTGAAGTGTACACCATTGCTAAAAAGGTGACTGGCATTGTAACTGACAATGCCGCCAGCATGGTGAAAGCCTTCACCATGTTCCCAGTCCCACAAAGGGATGACTATGAAGATGAAGACCAGAATGATGACTTGGAGGTTGAACCTTTGGATGATAAACTGGATTACTTTCCACCTGAGCACAGTTCTTGCTTTGCTCATACTCTTCAACTGGTTGTGCGTGATGCTCTGGAGCAGGCTGGGCCATTCAAGCAGGGTCTTTCAAAGGTGTCCAGAATAGTGTCTCACTGCCACAAATCCACCAGAGCAGCAGAGTTCCTGGAGGGAAACTGCAAACTTCAGATTGCAAATGCCACAAGATGGAATAGCCAGCTGAAGATGCTCAAGTCAATCCTAAGGGTTCCAGATGAAGTCCTCAGTAAGCTCCATGATGCATGCAAACTTACAGCTACTGATTTGAAAAACACTGGAGAGCTGTGTGAAATTCAGGAACCTTTTGAGGATGCCACTGACATGATCCAGGGTAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001232 True 960 mRNA 0.45 2 20503852 20504824

Neighbor

gene id symbol gene type direction distance location
AMCG00001233 NA coding downstream 48034 20454613 ~ 20455818 (-)
AMCG00001224 NA coding downstream 1011019 19491763 ~ 19492833 (-)
AMCG00001225 NA coding downstream 1025417 19477467 ~ 19478435 (-)
AMCG00001222 sh3bp4,LOC105905674,LOC103371228,LOC107687864,LOC107751470,LOC107571706 coding downstream 1080067 19407807 ~ 19423785 (-)
AMCG00001218 arl4c,LOC105900932,LOC103482382 coding downstream 1126575 19371043 ~ 19377277 (-)
AMCG00001231 NA coding upstream 63978 20568802 ~ 20582274 (-)
AMCG00001242 NA coding upstream 368802 20873626 ~ 20879379 (-)
AMCG00001247 NA coding upstream 503001 21007825 ~ 21021637 (-)
AMCG00001245 NA coding upstream 528234 21033058 ~ 21066211 (-)
AMCG00001246 LOC107593018,LOC107390280 coding upstream 623194 21128018 ~ 21154409 (-)
G129722 NA non-coding downstream 80990 20422640 ~ 20422862 (-)
G129712 NA non-coding downstream 484887 20018697 ~ 20018965 (-)
G129707 NA non-coding downstream 565958 19937661 ~ 19937894 (-)
G129621 NA non-coding downstream 1420689 19076750 ~ 19083163 (-)
G129593 dip2a,LOC108240767 non-coding downstream 1461894 19039167 ~ 19041958 (-)
G129736 NA non-coding upstream 13620 20518444 ~ 20518930 (-)
G129757 NA non-coding upstream 91541 20596365 ~ 20596744 (-)
G129802 NA non-coding upstream 284917 20789741 ~ 20791835 (-)
G129807 NA non-coding upstream 340872 20845696 ~ 20845939 (-)
G129844 LOC107575789 non-coding upstream 437233 20942057 ~ 20942449 (-)
G129566 NA other downstream 1614095 18888765 ~ 18889757 (-)
AMCG00001196 RPL37A,rpl37a,zgc:171772,rl37a,LOC107564751,LOC107567628 other downstream 1945635 18555235 ~ 18558217 (-)
AMCG00001193 NA other downstream 1971163 18524733 ~ 18532689 (-)
AMCG00001165 LOC100709166,LOC105019893,LOC103392195,LOC107668404 other downstream 2982582 17514386 ~ 17521270 (-)
AMCG00001156 NA other downstream 3316222 17126359 ~ 17187630 (-)
AMCG00001251 NA other upstream 735658 21240482 ~ 21270383 (-)
AMCG00001264 NA other upstream 1103013 21607837 ~ 21648508 (-)
G130004 NA other upstream 1284384 21789208 ~ 21822820 (-)
AMCG00001268 NA other upstream 1697222 22202046 ~ 22220416 (-)
AMCG00001270 NA other upstream 1754619 22259443 ~ 22302448 (-)

Expression


Co-expression Network