AMCG00001345


Basic Information

Item Value
gene id AMCG00001345
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 25777432 ~ 25801381 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001345
ATGAAAGACCCCAGCCTATCTCTTCTGAGCCGGGGATGTGGCCAGTTGGTGAAGACGGAGATGGACAGTGACGAGGGGAAGGTGGAAGTCTACTTCGAACCAGAGGATTATTTTAACTGGAGGTCCCACCACGCGTTTTTCCACCTGTCCCGCATTAGCGCAGGACGAGGACTTGAGCCAGTGCCTCCCAAAACATACAGCACCAGGAAAGGGCCTCTCATCTTGTATTCAGAGGACCTGGCTTTGTCCTCATGGCACTCTGGGGGGCTGGACAGGAAGAGGAGAGCCACCCGGCACTACAGACAGGAAGTGGAGCTACAGCTTCGTACCCTCAGGGATTTAACAGGAGCCATCTTGGCCTATGGGAATAAACAGGAAGGTCCAGGCAAAGGGCAGCCCTTCTTGCGCTTCCTCACCGACCCCCAGGAAGAGCAGGCCGAGAGACAGGTCCGCCCGGGCTACTCCGCCAAGCGCTACCTGGCACATCTCTCCCACACCTGGCATCCCCACGGCCAACCTCTCTCCAGCACAGATCTGCTGTCAGGTGTTCCTGGTGATCCCTCAGTGCCACATGATGACCCACAGACTCCATCCCTGTACCATGAAAACCAACTGGACCTGTCCACACCACCCAGGCCTTATAAAGTTCCCCTCGGTGTCCTACCAGCTATTCCTGAGGAGAACACCAACCCTCTTTCTAAAGAGCAGAGCCACGAGACGGAGGATGTGGTGTGGAAGAGGGCTGGGCGGCGTCGGAGGACGGAGTTTAGGTTCATGACCGAGTCCCTCAGGGCAGGGCTGAGCCCGGTACCCGAGACTGAACACCTGTCCCTTGGGGAAGACACTAGAAACACTGAGGAGCCGAAGGAGGCCCTGGGCAGGGCATTTGAAGGGAAGCAAAACGAAATGCCTAAGGAAGCCCACAGCTCCATGAAAACAGCCTCCATTGATTCCTCCTGGCTCCACAGTGAGAAGTCCCATGTCACCTATTACGGGGGCACCCTGGCTGGCGGGAGGAGAAACCCCACCTCGAAGTCAAGCCGAGTGGAACAGAAAGGACTGGACCCTTGGGGACTCAGCGAGGAACTGCACTTCCCTCCTATACCATCAGGCATGTGTTTTGGGTTGGGCCCGGTTAAGGAAACAGACACGGTAGATGTTTCCCATCATGAGGATGCAGGCAAGATGAGAGATGACCTTTCTCGAAGCCCCCGGCAGGAAGTGGAGGAAAGATGTGAGAGTCCATCTGCAGATAAGATGCCCAGGGCCCTTCCTGTACTGCGGCCCAGAGAGATAGACCTGGACTGGTTTGGGCAGAGACTCGAGCCAGACAAGACGGAGCCAGACGTGGGTCATCACCAAGAAGACTGCTTCTCGTCCGGCATTTTACCTCCCATCATCGGAAGGAAGGGCCCGGGAAACCAGAGACCCATGGCATCTTTCAGAGTCCACAGCAAAGACCCCCACGAACCCCAGACAGGCATCATCAGGGGCAGCATTCCCGAGGTCCTGAGAGaaagctatGAAGGCAATTCAGTGGGAAGCCTCATCATGGGTCCTGACGGAGAGATCTTGCGTTTGTCTCTTTTGGACCCTCTTGGCAAAGGCGGCGAGGAACTAGTCCTTGATGACATCACCCGAAAGGAAGCGCTGCGCTCCCTGTCTTCTGATGTCATCATGGGACAAGCCTGGACAGTATTTCTGCAGCCAGGCGGagTCAGGACTCATTCCAATTTTGAGGCCTTCACAGTTGATCTGGTAACAGGGCCTGACCGACCTCCAGCCAACTGTGCCGAGGAGCCAGGAGACATGCGGCTCCCAACAGGTTGTTTACATTGA

Function

GO:

id name namespace
GO:0035162 embryonic hemopoiesis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001345 True 1839 mRNA 0.56 12 25777432 25801381

Neighbor

gene id symbol gene type direction distance location
AMCG00001342 NA coding downstream 15026 25750342 ~ 25762406 (-)
AMCG00001339 nol5,nop58,LOC106575044,LOC107705548 coding downstream 43390 25727383 ~ 25734042 (-)
AMCG00001340 wdr12,LOC107677607,LOC107706661 coding downstream 61363 25708851 ~ 25716069 (-)
AMCG00001341 NA coding downstream 69756 25675568 ~ 25707676 (-)
AMCG00001336 NA coding downstream 192875 25577688 ~ 25584557 (-)
AMCG00001343 NA coding upstream 516 25801897 ~ 25815797 (-)
AMCG00001344 fzd7a,fzd7,LOC107751502,LOC107752890,LOC107668396 coding upstream 14457 25815838 ~ 25817520 (-)
AMCG00001346 cdk15,LOC106575174,LOC106574248 coding upstream 157692 25959073 ~ 25992808 (-)
AMCG00001354 NA coding upstream 498352 26299733 ~ 26360373 (-)
AMCG00001358 NA coding upstream 697912 26499293 ~ 26499996 (-)
G130781 NA non-coding downstream 326358 25449256 ~ 25451074 (-)
G130778 NA non-coding downstream 336606 25437645 ~ 25440826 (-)
G130777 NA non-coding downstream 342313 25434916 ~ 25435119 (-)
G130775 NA non-coding downstream 345765 25431443 ~ 25431667 (-)
G130769 NA non-coding downstream 356088 25421029 ~ 25421344 (-)
G130921 NA non-coding upstream 324430 26125811 ~ 26132592 (-)
G130944 NA non-coding upstream 487167 26288548 ~ 26293255 (-)
G130980 NA non-coding upstream 685812 26487193 ~ 26487686 (-)
G131015 NA non-coding upstream 828855 26630236 ~ 26630628 (-)
G131016 NA non-coding upstream 854630 26656011 ~ 26656252 (-)
G130779 NA other downstream 334801 25441613 ~ 25442631 (-)
G130771 NA other downstream 354078 25421924 ~ 25423354 (-)
G130767 NA other downstream 363585 25389227 ~ 25413847 (-)
AMCG00001327 NA other downstream 497463 25275802 ~ 25279969 (-)
G130735 NA other downstream 530980 25222896 ~ 25246452 (-)

Expression


Co-expression Network