AMCG00001362


Basic Information

Item Value
gene id AMCG00001362
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 26810338 ~ 26829451 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001362
ATGGTGCAGATCCAGCGGCCCAAGTCAGGCCGAAAGGGAGAACAGGCACGGCCGGGGCCCAGCTCCCAAGAGCAGGTGGAGGAGAGGCCATTCCTGGGCcgggtggaggagCCTCAGCAGAGGGACCCAGTGCCCTTGGAGGTTGCACTCCATCAGCAGGTGTCTGCTGTCCCGTTCTGCCCCTGTGTGGTCGGGCTGCTGGATTCGTTCACTCAGCCCGAGTCCTGCCTGCTGGTGCTGGAGCGGCCCGAGCCCTGCATAGACCTCTTCGACTTTGTGAAGCAGAAGGGCAGCTACCTAGAGGAGCCCATGGCCAAGGACTTCCTANNNNNNNNNNTGCAGGCGCTTCAGCACTGCCACGCCCATGGAGTGGTCCATCGGGACCTCAAGATGGAGAACATCCTGGTGGAGACCATCAGCCACAGCCTCAAACTCATTGACTTGGGACTGGCGAGTCGCCTGCAGGAGCGTTTCTACACAGACCAGGCCGTGTGGTCAGTGGGCGTTCTCCTCTATGTCCTGTTGTGCGGCTCGTACCCTTTCTGCGATGGCACCGCGATTATACAGGGAAGGCTCTCTTTCCCCAGTCGGCTCTCAAGAGATTGCTATGACCTGATCCGCAGCTGCTGTAACGTCTCTGCTGCCAGTCGGCTGACCCTGGAGGAGATCCTGCTCCATCCGTGGATGGCATGA

Function

GO:

id name namespace
GO:0048593 camera-type eye morphogenesis biological_process
GO:0007634 optokinetic behavior biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001362 True 693 mRNA 0.60 5 26810338 26829451

Neighbor

gene id symbol gene type direction distance location
AMCG00001359 NA coding downstream 274053 26529869 ~ 26536285 (-)
AMCG00001358 NA coding downstream 310342 26499293 ~ 26499996 (-)
AMCG00001354 NA coding downstream 449965 26299733 ~ 26360373 (-)
AMCG00001346 cdk15,LOC106575174,LOC106574248 coding downstream 817530 25959073 ~ 25992808 (-)
AMCG00001344 fzd7a,fzd7,LOC107751502,LOC107752890,LOC107668396 coding downstream 992818 25815838 ~ 25817520 (-)
AMCG00001368 NA coding upstream 96246 26925697 ~ 26931563 (-)
AMCG00001366 NA coding upstream 152949 26982400 ~ 27004571 (-)
AMCG00001367 NA coding upstream 212346 27041797 ~ 27042274 (-)
AMCG00001369 NA coding upstream 212858 27042309 ~ 27049417 (-)
G131016 NA non-coding downstream 154086 26656011 ~ 26656252 (-)
G131015 NA non-coding downstream 179710 26630236 ~ 26630628 (-)
G130980 NA non-coding downstream 322652 26487193 ~ 26487686 (-)
G130944 NA non-coding downstream 517083 26288548 ~ 26293255 (-)
G130921 NA non-coding downstream 677746 26125811 ~ 26132592 (-)
G131067 NA non-coding upstream 139427 26968878 ~ 26969197 (-)
G130779 NA other downstream 1367707 25441613 ~ 25442631 (-)
G130771 NA other downstream 1386984 25421924 ~ 25423354 (-)
G130767 NA other downstream 1396491 25389227 ~ 25413847 (-)
AMCG00001327 NA other downstream 1530369 25275802 ~ 25279969 (-)
G130735 NA other downstream 1563886 25222896 ~ 25246452 (-)

Expression


Co-expression Network