AMCG00001366


Basic Information

Item Value
gene id AMCG00001366
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 26982400 ~ 27004571 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001366
TGTGGAGACACCTCTTCCTCTATAGCGACCCGGAAAATAAAAGAGGCTGGAGCAGGAGGCtcttttgcaatatatatatatagatctgcTGTTAGTTACACTCAGGTCTCCGGGTGGTGCAATGTGGATTGTGCGCAGCTGGAGATGTTTTGATCTATCTTGGGTAACGAAAAAAGACTAATCGTCTCAAACTGAGGGTGCAACTGGCCTGTGTAATTCAGCATGGCGGTGGAACAGTCCAGTGCAACACAAGACCCCAAGGATGAATTTTACTATAATCGTAAAGAGATCAGTATCTACGACTACCCCTTACCCCTTTTCAACCTCCGAGCAGTGAAAACTATAGAAGACATGGAAAACTCTTTCCAGATGCTCAGGAAACAGACACCACGGCGGTACAACCCCAGGATGAGGAGCGAGCTGGAGCGGTTGAGATCGTTCCAATGGGAGGATGTGTGGGGAAGCCCATCAGAACTGGCGGAGGCCGGGTTTTACTCCATTGCAGAACACAAAGCGATGCAGTGCTTCTGCTGTGGCATACTAGTGTGCTATGTGCCACCGCAGAGGTCACCTTTGGATGTGCATGAGGAACGGGAGCCAGGATGTGGCTTTATCACAGGAAAGGATGTCAGGAATATACCCAAATATGACACACGTGTGCAGGCATCTGACTACATGAGCCCAGATACCTTTGACACCAAAGAGAAGCGACTGGAGTCCTTCAGTAACTGGCCTTTCTACACCCAGATTGATACTGTCTTGTTTGCAGATGCTGGATTTGTCTATACAGGACAGAAAGACAATGTGCTGTGCTTCTCTTGTGGAGGGTGTTTGGGTCACTGGGAAGTGGATGATGATCCCTGGAGAGAGCACGCCAAGTGGTTTCCTGAGTGTGAATACCTTCAGAATGAGAAAACAAGAGAAGAAATCCAGGACTACATCAACACATATGATATGTTCAAAGGAGTAAAGggttctaattataataatgtaataaacactCCAGTGGGAAGAGAGTTCATTTTCCCAACTCTTTTGGGGGAAAAGCAGAATATATTTGAAGATGAGCGTCTTCGTCTGGAGTCCTTCCTGCACTGGCCAGCAGACTCCCCGACAGACCCAAAAGACCTCAGCAGAGCTGGATTTTTCTATACTGGCACACAGGACATGGTGAAGTGCTTCATCTGTGGCATTGAGGACCTGCAGTTAAAAGAGGGAGACGTTCCTTCTGAATACCACAGGAAATATTCTCCAAAGTGTTCATATGTTCTACAGATGCTGCAACATCCAGAAAACACTCTGAAATCAGAATCAGCATCCAAGAAGGAAATCCCAATCACCAAGCAGGCAGTATTTCCAGAAACTAAATATATGAACGAGGACTTGAAAGAATATGAGGAGAGACTGTCTAACTTCCTGAAAACCGTTTACAACAGTCCTGAGTTCCGAAAAACACCTGTGGCAGGAGACATCAGTCACTTCGCCGTTGACTTGAAATTAACATTCATGGACCTTGCCATGACTCTGGCCGATGCCGAGGGGAATTTGATAAAGATGGTGACCCTGCCTGACATACTGAAGAGCTTGAGTGGCCTGACTTTtgtggaaggagagagaggcatGGGGAAGACGGCCCTGCTGAAGAAGATTGCCATCCTCTGGGCGTCTGAGCACTGCCCTGTCCTAAGCCGCTtccagtttgtgttttatgcCTCTCTGTCCGAGATCAACGCAGACCCTTCCCTGAGAGCACAGCTTGCAGGGATGATGAGGATGCATGCGGAGACATCCTTGTTTCTCCTGGATGACTTTGAACAGGAAGATCACCATCTACTGGAGACTCTGGCTGAGAGAGCCAAGCCCCAAGAAGGATCTCGTTGCTTCTCTGCTGTCGTTGCCTTACGTCCTTTGTTGATGGCGAGTCTTGGCTTCCCCGGGCACAAAATCACTTTACATAATTTACCTACCTCCAGGGTGGCATACCTGGTTAAAAGGGTGATGGCACCACACTTAAAACTGATGAAAAagtctttgtttaaaatatgcagCCCTTCATTCAAGAAGAGTTTGAAAATACCGTTTTGTGCACTGGCTCTCTGTGTTTCACTGGTGCAAAAACCTGGGCAGGCTCTGACCCCAGGCTCCTCATTCTACAGCACCTACCTGAGGCATCTCAGGCAGGGTCAGGCTAAGGATGAGGAGCTGCTTTTAACAGAAATGTTGGCTTGGGAAGGGCTGATGAGTAATCGGTCTGAGTTTTCTGAACAGGACTTGGCTCAAGCCGGATTAAACCCCAGTCATCTGACCGATCAGGGATTACTGGTGAAGGGGAAAGGGGGGCCTCCCCTCTTGCGCTTTGTAGATGAGACCTTCCAGGAGTACTTGGCAGGGAGATATTTAGCAACACGTTTCAATGCGGACAACCCAGAGACTGCTATGGCATGTCTGAGCCAAATCATGCCTTTTCCTAAAGCAATAGGGCTCCACTATTTATTGCTCGTTCACTGTTGCCACCTCTCTGCCAGAGCTGCAGCAGTCATCATCCCCCAGTTGCTGGCACAGTACAGCCATATAGAAACTTGGACCTCCACTGATGCAGACAAGGGAATAGATGCACAGTTCAGCTCTCTTACTGTAGGCAGTTCTGTTTTAAGTAAATTTGTTAAAATTTGGGACCAGCTTGTTAAAGGGAACCCTGAGCTGAGGACCTGGGTggtggacagacagacattcCATTTGACCAGCGTGGAGTGGGTGCTCAAACTCATCTATGAAAGCCACAGCACTGCAGTGGGCTTGACACTCGTTCGGGAGCACCTGGCAGGGAAGACCTTGCAGTTCGACCCTCCTCTTCCACAGGGTGTATCTGTGCTGCGGTTCATGGCAGACTGTCCAGAATGCCTGTCAGAGCTGCGATGTGTTCGTGTGTCCCTCTCCGACTGCTTGGAATGTGTGGAGACAGATCCTTCCCAGCCTTATTCATGGACGTTTGTGCAGATTCCCAAGGAGTTCATTGCTGCCTTCCAGCCAGCACAGCGGCAGAACATCACCGGGCAAACACTGCAGCTGGTTGCACAGAATGTCTCCACACTGGAAAGGAACGACATCTTCTAtctgtctgttctgttttctcTGTTCAGGAGGATTGAAGTGGAAGTGCACAACAGCCCAGGTTTCCTCTCAGCCATAGAGAGCGCCCTTGAAAAGTACAAAGAAAACTGGGAGAGGTGCCAAATAGTTGGGTCTGACCTGACATTGAAGGACAGGCACTTTCTGTGTTCGAACTCAGCACTTAAAGTTTTGGAACTTGAAAGAATGCCTGAATATGTTCTGTGCAGCTTGGGCAAGTTTACCAGCCTGGAGGAGCTGTGCGTGTCTGTCAGTCCTGCATCACAGATTGTTGAAAATATAGTACTTGGATTCAGGAAGCTGGTCAACATGAAAAGTATCAAACTGTACAATATTGACCTCTCAGAAGATTCTTCCAGTTTAGGTAAGTCTTTGAAGTCTCTGTCACATCTTGAGTGTCTGAAGCTGTCTGGAGGCAGTGAGATGACCCAGAGGGGCGACCTCATTGTGCAGCTGCTTCCCAGCTTCCCCAGCCTGCACACTCTGCAGATGGACTCCTGTCTCAATAATGACTCTCTGCACATCCTAGCACAGGCAGCGAAGGCCGGCCACTTGCTTCGGCTCCGCAAGCTGCTTCTCAACGACAACTACACCGTCACTGATTTGGGCTGGAGGCGGTTCTTTGAAGGGCTCGACAACCTAGGACAGCTGAGCAGCTTGTCTCTGTCCCGGGGGAACTCAGTGTCTCCTGTGGATCCTGGGGAGGAGACAATCCAGGTTCTGGTGAGGGCTGTGTCTCGGATGCCTTGCCTTCGCTTCCTCTCCCTGGTTGGATGGTTTTCAAAGGAGGAGGACACAAAGCTGGTCAGAGCCCTGGAGGAAAGCCACTCCTCTCTGGTTGGCATTGATCTGCATGTCGTTGATTTTCAGCCCCCAGATCAGATTAAGATCTTAATATTAAAGGGAATCAGATCTGTTTTCGATTctacatttacataaaagatGCACCTTCAGGATCTTTATATGTTGTtaaccatttttatatatagtaaaaaAGTATGTTTCTATGATATTATTATGACGCTGGCTCATCCCATGGTGAGGAACAGTGGATACATTCCTGGCCTATAAATGGACTGGACAGTTAtactggattaaatcaaatattaaatggtGCACTGCAGTGAGTTAAGCAGCTGAGttacctgtgtgtttgtctatgtCTCTTGTTCCTTGTAGCAGGATGTTACAGAACCTGTGCTAACCAGTCTATAAATGCAGCCAAAGTGGGCTGTGGGcatgacaaataaaacaaataaggatGGAACTGGGAAGACAGATAGTTGGAGATTCAGAGTTATGATATGGCATGAACtggaatttaattttgtaaaaagaaGTAATCAGATGCCTGTtgttgcaataaataaatgattggtacCGTTGCAAAAGGATCATGTCATCAATAGCCATATTTCTTTCATTATACTTAAgatgtacaaacaaaataaatgacaccttcttattataaattatttgatcAACACTGCCCTGTAATGACTCAAGCctgatttatgcttctgcaACGATAAATCTCTGTATAGTGACGCAGAGAAtgggtttctgggtaagcatAGCTCACAGAGGAGCCGACACGCACATCTCCAAAATCTCAACTACGGGTCGTGTGTGTCTGCGGTCCTGTCCATCAAACAAAtgctgattggttgagcagggaAATATATCTGGTAAACACACCATGTTGAGATGTGGTTAcccaaaatgaattaaatcaattcaattCTGAGAACACTAATAGTGTGAACCTCTTCCTTTACTGGAAAAATTGCTACTACAGGAGTACTACTTCTACTAAGAATTAAGTCAGTAACTGAACAAGCAtgtgtttaaaacaacacaagatttaaaacaagatttaaTTATGTAACTGTAGAATCCAAtaacacaaatcaaacaaaccaacaagTATGTAAACCACACACAGTAttggtataaaaataataaagtgtggTGTGTTGTACCTTGGGAAACAACAGCCCCATGTCTCTATCTTTATACAATCGTCAAGCTGCACAGAAAATACTACTACAAATTTATTATTGAGAAACgggtttctgtttatttgttttgtcttagtTTTCTGTAGATTCTGATTTGGTAAATGTGACACTTCCCCCTTGTGCATGTGTTAACGttacgtgcaagtatgttggcagacacaTATGATCCCCGTGCATGTTCACAGAGATGCAGACGCAGAAGCATAATTCAGCCTTTAGgtctaaaagaaaaatactgtacTGGTCTAAATAACAGAGATTTTCACAACATTTGAATGCAGCCAACAACTTAgcttgagttgtttttttcactctctctttaaaataaccgctgtgtttgtttgtgtaagcATAAGTCAATTTGTGTGTATCATTAACTGTTGTCCCACTCACTTTCTCTGGTTGTGTCAGTGCTAGTGGAGGTCAGTGTGCAGGGCTTTGTAGCAGACATGTCCTCCACTCAGCAGTATGAGAACCAGatgtccagtccagtgcagactgtttttgtgtttccatGGAGGGTGATTCTGCAGTCTATCGCCTCTTGATCCAGGTCAGGGTGCTGGGGATTGAGGCTGAGGTTCGAGAGAAACTCCAAAACTCCAAACTTGCAACTTCAAAGCAAAATTGTGAAAAGACAAATTGTCAACAGCAAGACATTACTCTCAATGACAACACCACAAGGTTACAAGAACTTAAGCAGGCTCGATTGGTGTCCCCTTGGTATAGTTATTTTGTCTGATTGCTTCTCAGCTCagcaaattaatattgaatattgataTATGTAGTGGCCAGGTTAAAGGTTGGAAGACTCAGAGAGCATCTTCTGCATCAGAAAGATGGCAGACACCACTGTGACTGGTACCATCTCTAATTAAGAATTAATTCAGAATTAAAGGGGCACTACCACCTGCTTAGATTCCAGCCCACCAACTCCAGTCCTAAGGTTACACCCTGACCCCTGTACCTGgtgttctcaaccctggtcttggagaCACATTGTCTCACTGCTTTTTATTCCATTCAagtgaattaatgtattgtattgacaTATTTGATACCTCATTTGttgaactaaaaataaaaatttctCCAGAACACTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001366 True 6254 mRNA 0.45 13 26982400 27004571

Neighbor

gene id symbol gene type direction distance location
AMCG00001368 NA coding downstream 50837 26925697 ~ 26931563 (-)
AMCG00001362 NA coding downstream 152949 26810338 ~ 26829451 (-)
AMCG00001359 NA coding downstream 446115 26529869 ~ 26536285 (-)
AMCG00001358 NA coding downstream 482404 26499293 ~ 26499996 (-)
AMCG00001354 NA coding downstream 622027 26299733 ~ 26360373 (-)
AMCG00001367 NA coding upstream 37226 27041797 ~ 27042274 (-)
AMCG00001369 NA coding upstream 37738 27042309 ~ 27049417 (-)
G131067 NA non-coding downstream 13203 26968878 ~ 26969197 (-)
G131016 NA non-coding downstream 326148 26656011 ~ 26656252 (-)
G131015 NA non-coding downstream 351772 26630236 ~ 26630628 (-)
G130980 NA non-coding downstream 494714 26487193 ~ 26487686 (-)
G130944 NA non-coding downstream 689145 26288548 ~ 26293255 (-)
G130779 NA other downstream 1539769 25441613 ~ 25442631 (-)
G130771 NA other downstream 1559046 25421924 ~ 25423354 (-)
G130767 NA other downstream 1568553 25389227 ~ 25413847 (-)
AMCG00001327 NA other downstream 1702431 25275802 ~ 25279969 (-)
G130735 NA other downstream 1735948 25222896 ~ 25246452 (-)

Expression


Co-expression Network