G125713


Basic Information

Item Value
gene id G125713
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 1323503 ~ 1328639 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU157567
cttagattttcaaaaagcttttgataaggttccacaccaaagactgatcctcaaattggaagctgtaggcattcagggtaatgtaagtagatggattatgaactggttgatgtctaggaaacagagggtgtcgattagaggagtcgcttctaactggagtgaggttgttagtggagttccacagggatcagtactagggcctttgctttttctaatctatattaatgatctggactctgggatcgttagcaaacttgtcacatttgcagatgatactaaaataggcaAACAcgatgctagggtatattgtcaaaagtgtagagttgagaacaagggcagtgatgttcagactgtacaatgcactagttagagctcatctggatactgtggacagttctgggctccacacttcaagaaagatatcgctgctctagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaatgtcctactgagagactgagggacctgaaccttttcacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157567 True 521 lncRNA 0.43 2 1323503 1328639

Neighbor

gene id symbol gene type direction distance location
AMCG00000704 NA coding upstream 50538 1256781 ~ 1272965 (+)
AMCG00000708 NA coding upstream 74078 1248741 ~ 1249425 (+)
AMCG00000705 NA coding upstream 89569 1226317 ~ 1233934 (+)
AMCG00000702 vwc2l coding upstream 190318 1111881 ~ 1133185 (+)
AMCG00000695 cps1 coding upstream 908708 414444 ~ 414795 (+)
AMCG00000715 NA coding downstream 66757 1395396 ~ 1395970 (+)
AMCG00000712 NA coding downstream 85156 1413795 ~ 1422116 (+)
AMCG00000713 creb1b,creb1,LOC107663917,LOC107551947 coding downstream 104353 1432992 ~ 1447408 (+)
AMCG00000714 ccnyl1,LOC107698526,LOC107733650,LOC107738507,LOC107663902 coding downstream 123973 1452612 ~ 1463637 (+)
AMCG00000717 NA coding downstream 226039 1554678 ~ 1575439 (+)
G125684 myo1b non-coding upstream 16168 1304095 ~ 1307335 (+)
G125613 NA non-coding upstream 726368 596787 ~ 597135 (+)
G125612 NA non-coding upstream 748011 575290 ~ 575492 (+)
G125605 erbb4,LOC107555909,LOC107741926,LOC107662043,LOC107721020,LOC107660610 non-coding upstream 791591 529899 ~ 531912 (+)
G125597 NA non-coding upstream 836300 456502 ~ 487203 (+)
G125736 NA non-coding downstream 97994 1426633 ~ 1426943 (+)
G125767 NA non-coding downstream 266184 1594823 ~ 1609210 (+)
G125756 NA non-coding downstream 289169 1617808 ~ 1621888 (+)
G125955 NA non-coding downstream 963196 2291835 ~ 2293872 (+)
G125986 NA non-coding downstream 1099031 2427670 ~ 2520585 (+)
G125561 NA other upstream 919912 339640 ~ 403591 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other downstream 271057 1599696 ~ 1606031 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other downstream 340206 1668845 ~ 1698573 (+)
AMCG00000734 NA other downstream 476768 1805407 ~ 1814157 (+)
AMCG00000848 NA other downstream 4132662 5461301 ~ 5465981 (+)
G127134 NA other downstream 7288560 8617199 ~ 8620195 (+)

Expression


Co-expression Network