Gene
RNA
| Item | Value |
|---|---|
| gene id | G126554 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030137.1 |
| NCBI id | CM030137.1 |
| chromosome length | 27060302 |
| location | 5013868 ~ 5034697 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU158674 | True | 554 | lncRNA | 0.32 | 2 | 5013868 | 5034697 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000835 | arl5a,LOC107555355 | coding | downstream | 59694 | 4944217 ~ 4954174 (-) |
| AMCG00000836 | NA | coding | downstream | 75080 | 4864200 ~ 4938788 (-) |
| AMCG00000824 | NA | coding | downstream | 330227 | 4669268 ~ 4683641 (-) |
| AMCG00000825 | LOC107714772,LOC106574437,LOC104928565,LOC106575257 | coding | downstream | 362755 | 4646961 ~ 4651113 (-) |
| AMCG00000820 | NA | coding | downstream | 549124 | 4429747 ~ 4464744 (-) |
| AMCG00000842 | sec22a,LOC107722877 | coding | upstream | 86410 | 5121107 ~ 5132844 (-) |
| AMCG00000843 | pdia5,LOC107596065,LOC107555900,LOC107661141,LOC107660642 | coding | upstream | 103260 | 5137957 ~ 5174410 (-) |
| AMCG00000846 | dirc2 | coding | upstream | 244847 | 5279544 ~ 5316096 (-) |
| AMCG00000854 | NA | coding | upstream | 319689 | 5354386 ~ 5370155 (-) |
| AMCG00000852 | NA | coding | upstream | 346443 | 5381140 ~ 5391829 (-) |
| G126476 | NA | non-coding | downstream | 236084 | 4773581 ~ 4777784 (-) |
| G126445 | NA | non-coding | downstream | 305017 | 4703139 ~ 4708851 (-) |
| G126432 | NA | non-coding | downstream | 370402 | 4642680 ~ 4643466 (-) |
| G126430 | NA | non-coding | downstream | 372527 | 4641058 ~ 4641341 (-) |
| G126429 | NA | non-coding | downstream | 375583 | 4637958 ~ 4638285 (-) |
| G126563 | NA | non-coding | upstream | 81357 | 5116054 ~ 5119036 (-) |
| G126631 | NA | non-coding | upstream | 337552 | 5372249 ~ 5372459 (-) |
| G126665 | NA | non-coding | upstream | 427870 | 5462567 ~ 5464052 (-) |
| G126698 | NA | non-coding | upstream | 535247 | 5569944 ~ 5572133 (-) |
| G126767 | NA | non-coding | upstream | 908689 | 5943386 ~ 5949894 (-) |
| AMCG00000838 | cacnb4,LOC108434427 | other | downstream | 31217 | 4957138 ~ 4982651 (-) |
| G126427 | NA | other | downstream | 377352 | 4636096 ~ 4636516 (-) |
| AMCG00000804 | NA | other | downstream | 1357307 | 3553047 ~ 3656561 (-) |
| G126096 | NA | other | downstream | 1864616 | 3131714 ~ 3149252 (-) |
| AMCG00000777 | coq10b,LOC107690612 | other | downstream | 1873379 | 3133876 ~ 3140489 (-) |
| G126700 | NA | other | upstream | 538008 | 5572705 ~ 5573027 (-) |
| AMCG00000888 | LOC102209482 | other | upstream | 1654871 | 6689568 ~ 6733817 (-) |
| G127039 | LOC100136012,LOC107575789 | other | upstream | 2595218 | 7629915 ~ 7645722 (-) |
| G127292 | NA | other | upstream | 4384299 | 9418996 ~ 9419325 (-) |
| G127443 | NA | other | upstream | 5239990 | 10274687 ~ 10278211 (-) |
