G126569


Basic Information

Item Value
gene id G126569
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 5126559 ~ 5126808 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU158695
GCTTTCAATGGCATGAACTCCACGGATTAAATTGAGACCGCCACAGAGCAGGCTTAACACACAAGACACGATCCCAGCAAGAGTCACGGGCTCCAGCATTTGGTTTGGAGCTACAATggaatagaataaataaatacatatttatacacacagatTAATGATTAAAGTTGTCATTTCTGGCCTAAGAAATATTAAgcaaaagacattttaatgaattaaaatgtatataactaATAAACCctgtattgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158695 True 250 lncRNA 0.36 1 5126559 5126808

Neighbor

gene id symbol gene type direction distance location
AMCG00000841 adcy5,LOC107555914,LOC107660638,LOC107661140 coding upstream 10575 5081856 ~ 5115984 (+)
AMCG00000840 LOC107714401,LOC107596066,LOC107661140,LOC107555914,LOC107741932,LOC107660638 coding upstream 78475 5039948 ~ 5048084 (+)
AMCG00000837 LOC107580446 coding upstream 91862 5025295 ~ 5034697 (+)
AMCG00000832 NA coding upstream 262711 4844092 ~ 4863848 (+)
AMCG00000831 tnfaip6 coding upstream 287679 4833357 ~ 4838880 (+)
AMCG00000844 NA coding downstream 95189 5221997 ~ 5265705 (+)
AMCG00000845 NA coding downstream 189389 5316197 ~ 5332706 (+)
AMCG00000849 NA coding downstream 270517 5397325 ~ 5404570 (+)
AMCG00000847 NA coding downstream 299353 5426161 ~ 5441254 (+)
AMCG00000857 NA coding downstream 346286 5473094 ~ 5487499 (+)
G126568 NA non-coding upstream 2229 5121045 ~ 5124330 (+)
G126500 neb,LOC106518889,LOC106951376,LOC103134835 non-coding upstream 246056 4876867 ~ 4880503 (+)
G126368 NA non-coding upstream 881523 4244732 ~ 4245036 (+)
G126301 NA non-coding upstream 1396503 3725920 ~ 3730056 (+)
G126248 NA non-coding upstream 1453383 3670802 ~ 3673176 (+)
G126570 NA non-coding downstream 506 5127314 ~ 5127656 (+)
G126572 sec22a non-coding downstream 1699 5128507 ~ 5130661 (+)
G126573 NA non-coding downstream 4910 5131718 ~ 5131991 (+)
G126574 NA non-coding downstream 5566 5132374 ~ 5132956 (+)
G126621 NA non-coding downstream 223174 5349982 ~ 5350242 (+)
AMCG00000734 NA other upstream 3312402 1805407 ~ 1814157 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other upstream 3427986 1668845 ~ 1698573 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other upstream 3520528 1599696 ~ 1606031 (+)
G125561 NA other upstream 4722968 339640 ~ 403591 (+)
AMCG00000848 NA other downstream 334493 5461301 ~ 5465981 (+)
G127134 NA other downstream 3490391 8617199 ~ 8620195 (+)
AMCG00000949 NA other downstream 4973475 10100283 ~ 10154187 (+)
AMCG00001002 myo3b other downstream 6872856 11999664 ~ 12011425 (+)
AMCG00001022 NA other downstream 7162142 12288950 ~ 12385042 (+)

Expression


Co-expression Network