G126573


Basic Information

Item Value
gene id G126573
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 5131718 ~ 5131991 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU158700
CAATCGCCCATTGCTCATGTGATGTCCAATAAACTGTAGTTCCTGACAAACACATTGCTTCACCAAACACCCTGCACACAACATGCCTTTTCATTCAACACCTGCCTCCTGCTCCACAGGCTAGGGTCCCTGTGGTTTTGGGCATGTGTGGTACTGGTGGGTGAATTCAAAGGCAAAACAGAGCAGATGGGGGGCTGAAATGCGAGCAAGCCCCTTTCCACAGAAATATTGCAAATGTACTGTAAACAATCCACCAGGACAAAGTGTAGCTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158700 True 274 lncRNA 0.48 1 5131718 5131991

Neighbor

gene id symbol gene type direction distance location
AMCG00000841 adcy5,LOC107555914,LOC107660638,LOC107661140 coding upstream 15734 5081856 ~ 5115984 (+)
AMCG00000840 LOC107714401,LOC107596066,LOC107661140,LOC107555914,LOC107741932,LOC107660638 coding upstream 83634 5039948 ~ 5048084 (+)
AMCG00000837 LOC107580446 coding upstream 97021 5025295 ~ 5034697 (+)
AMCG00000832 NA coding upstream 267870 4844092 ~ 4863848 (+)
AMCG00000831 tnfaip6 coding upstream 292838 4833357 ~ 4838880 (+)
AMCG00000844 NA coding downstream 90006 5221997 ~ 5265705 (+)
AMCG00000845 NA coding downstream 184206 5316197 ~ 5332706 (+)
AMCG00000849 NA coding downstream 265334 5397325 ~ 5404570 (+)
AMCG00000847 NA coding downstream 294170 5426161 ~ 5441254 (+)
AMCG00000857 NA coding downstream 341103 5473094 ~ 5487499 (+)
G126572 sec22a non-coding upstream 1057 5128507 ~ 5130661 (+)
G126570 NA non-coding upstream 4062 5127314 ~ 5127656 (+)
G126569 NA non-coding upstream 4910 5126559 ~ 5126808 (+)
G126568 NA non-coding upstream 7388 5121045 ~ 5124330 (+)
G126500 neb,LOC106518889,LOC106951376,LOC103134835 non-coding upstream 251215 4876867 ~ 4880503 (+)
G126574 NA non-coding downstream 383 5132374 ~ 5132956 (+)
G126621 NA non-coding downstream 217991 5349982 ~ 5350242 (+)
G126667 NA non-coding downstream 334991 5466982 ~ 5467528 (+)
G126697 NA non-coding downstream 437979 5569970 ~ 5571932 (+)
G126714 NA non-coding downstream 587277 5719268 ~ 5799635 (+)
AMCG00000734 NA other upstream 3317561 1805407 ~ 1814157 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other upstream 3433145 1668845 ~ 1698573 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other upstream 3525687 1599696 ~ 1606031 (+)
G125561 NA other upstream 4728127 339640 ~ 403591 (+)
AMCG00000848 NA other downstream 329310 5461301 ~ 5465981 (+)
G127134 NA other downstream 3485208 8617199 ~ 8620195 (+)
AMCG00000949 NA other downstream 4968292 10100283 ~ 10154187 (+)
AMCG00001002 myo3b other downstream 6867673 11999664 ~ 12011425 (+)
AMCG00001022 NA other downstream 7156959 12288950 ~ 12385042 (+)

Expression


Co-expression Network