Gene
RNA
| Item | Value |
|---|---|
| gene id | G126574 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030137.1 |
| NCBI id | CM030137.1 |
| chromosome length | 27060302 |
| location | 5132374 ~ 5132956 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU158701 | True | 583 | lncRNA | 0.47 | 1 | 5132374 | 5132956 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000841 | adcy5,LOC107555914,LOC107660638,LOC107661140 | coding | upstream | 16390 | 5081856 ~ 5115984 (+) |
| AMCG00000840 | LOC107714401,LOC107596066,LOC107661140,LOC107555914,LOC107741932,LOC107660638 | coding | upstream | 84290 | 5039948 ~ 5048084 (+) |
| AMCG00000837 | LOC107580446 | coding | upstream | 97677 | 5025295 ~ 5034697 (+) |
| AMCG00000832 | NA | coding | upstream | 268526 | 4844092 ~ 4863848 (+) |
| AMCG00000831 | tnfaip6 | coding | upstream | 293494 | 4833357 ~ 4838880 (+) |
| AMCG00000844 | NA | coding | downstream | 89041 | 5221997 ~ 5265705 (+) |
| AMCG00000845 | NA | coding | downstream | 183241 | 5316197 ~ 5332706 (+) |
| AMCG00000849 | NA | coding | downstream | 264369 | 5397325 ~ 5404570 (+) |
| AMCG00000847 | NA | coding | downstream | 293205 | 5426161 ~ 5441254 (+) |
| AMCG00000857 | NA | coding | downstream | 340138 | 5473094 ~ 5487499 (+) |
| G126573 | NA | non-coding | upstream | 383 | 5131718 ~ 5131991 (+) |
| G126572 | sec22a | non-coding | upstream | 1713 | 5128507 ~ 5130661 (+) |
| G126570 | NA | non-coding | upstream | 4718 | 5127314 ~ 5127656 (+) |
| G126569 | NA | non-coding | upstream | 5566 | 5126559 ~ 5126808 (+) |
| G126568 | NA | non-coding | upstream | 8044 | 5121045 ~ 5124330 (+) |
| G126621 | NA | non-coding | downstream | 217026 | 5349982 ~ 5350242 (+) |
| G126667 | NA | non-coding | downstream | 334026 | 5466982 ~ 5467528 (+) |
| G126697 | NA | non-coding | downstream | 437014 | 5569970 ~ 5571932 (+) |
| G126714 | NA | non-coding | downstream | 586312 | 5719268 ~ 5799635 (+) |
| G126781 | map3k19,LOC106586307 | non-coding | downstream | 1067953 | 6200909 ~ 6201605 (+) |
| AMCG00000734 | NA | other | upstream | 3318217 | 1805407 ~ 1814157 (+) |
| AMCG00000729 | satb2,LOC107690605,LOC107569722 | other | upstream | 3433801 | 1668845 ~ 1698573 (+) |
| AMCG00000723 | crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 | other | upstream | 3526343 | 1599696 ~ 1606031 (+) |
| G125561 | NA | other | upstream | 4728783 | 339640 ~ 403591 (+) |
| AMCG00000848 | NA | other | downstream | 328345 | 5461301 ~ 5465981 (+) |
| G127134 | NA | other | downstream | 3484243 | 8617199 ~ 8620195 (+) |
| AMCG00000949 | NA | other | downstream | 4967327 | 10100283 ~ 10154187 (+) |
| AMCG00001002 | myo3b | other | downstream | 6866708 | 11999664 ~ 12011425 (+) |
| AMCG00001022 | NA | other | downstream | 7155994 | 12288950 ~ 12385042 (+) |
