G126667


Basic Information

Item Value
gene id G126667
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 5466982 ~ 5467528 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU158805
CCATGATagcgagattatcagtgttattcacttcacctgtcagtgctcataatgttatgtccAACGAAATGTCCAATGTCATAATGTCCAACGAAAATAAAACTAGTATGGTTCCGTCTTACTTGAAGAAGAGAATAACGTGGGAAAAGCAAGCTGTGAATGTAATGTAGAAGCTCATCCGAAGAGAAAGAAATCCTTCCTTTGTAAATTGAATGTCTGCAGCTCCTCTTCGACAACTGAAGATGTGCTCCTATTAATTAAGTAGATTATTCAGGTataaaggaaaaggagaaacatGGAGATGTATTTTTCTCCAACTGCACCTGCATTACTCAGATAGGTAGCACTGCCATAAACCGGTTGCTGCAAAGTGGCGTAATGCGTGCCTGAAAGCAGTTTAAAGTGATAtcgacctttttgtttttctaagtaGCGAAACTGCAGGTGGGTTACATCAGCAATAACTTACTTGCTGTAGTACAATACTGTCCATGTGTAAAATGACATACCTAGCTACTCCACCCACAAAACAGTCAGTACAGCTTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158805 True 547 lncRNA 0.39 1 5466982 5467528

Neighbor

gene id symbol gene type direction distance location
AMCG00000847 NA coding upstream 25728 5426161 ~ 5441254 (+)
AMCG00000849 NA coding upstream 62412 5397325 ~ 5404570 (+)
AMCG00000845 NA coding upstream 134276 5316197 ~ 5332706 (+)
AMCG00000844 NA coding upstream 201277 5221997 ~ 5265705 (+)
AMCG00000841 adcy5,LOC107555914,LOC107660638,LOC107661140 coding upstream 350998 5081856 ~ 5115984 (+)
AMCG00000857 NA coding downstream 5566 5473094 ~ 5487499 (+)
AMCG00000855 clasp1 coding downstream 30094 5497622 ~ 5556669 (+)
AMCG00000856 NA coding downstream 89923 5557451 ~ 5568381 (+)
AMCG00000859 NA coding downstream 349593 5817121 ~ 5824643 (+)
AMCG00000862 LOC107551943,LOC108430494,LOC107663912,LOC107733654 coding downstream 472083 5939611 ~ 5949304 (+)
G126621 NA non-coding upstream 116740 5349982 ~ 5350242 (+)
G126574 NA non-coding upstream 334026 5132374 ~ 5132956 (+)
G126573 NA non-coding upstream 334991 5131718 ~ 5131991 (+)
G126572 sec22a non-coding upstream 336321 5128507 ~ 5130661 (+)
G126570 NA non-coding upstream 339326 5127314 ~ 5127656 (+)
G126697 NA non-coding downstream 102442 5569970 ~ 5571932 (+)
G126714 NA non-coding downstream 251740 5719268 ~ 5799635 (+)
G126781 map3k19,LOC106586307 non-coding downstream 733381 6200909 ~ 6201605 (+)
G126782 NA non-coding downstream 736170 6203698 ~ 6206033 (+)
G126805 NA non-coding downstream 745654 6213182 ~ 6213407 (+)
AMCG00000848 NA other upstream 1001 5461301 ~ 5465981 (+)
AMCG00000734 NA other upstream 3652825 1805407 ~ 1814157 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other upstream 3768409 1668845 ~ 1698573 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other upstream 3860951 1599696 ~ 1606031 (+)
G125561 NA other upstream 5063391 339640 ~ 403591 (+)
G127134 NA other downstream 3149671 8617199 ~ 8620195 (+)
AMCG00000949 NA other downstream 4632755 10100283 ~ 10154187 (+)
AMCG00001002 myo3b other downstream 6532136 11999664 ~ 12011425 (+)
AMCG00001022 NA other downstream 6821422 12288950 ~ 12385042 (+)
AMCG00001098 NA other downstream 9682747 15150275 ~ 15184392 (+)

Expression


Co-expression Network