G126767


Basic Information

Item Value
gene id G126767
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 5943386 ~ 5949894 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU158942
TGTAATCAAAATTCATTTTACTATTACAAAAGAGACGATCCAACTTAATTTTGGGGACACCATAACCTTCCAACCTCACAGACGTATGTACTTAGTATTACacaacatctttatttttatgtttaacagTTTAGGGTTTCACAACAATCACTATCGCTGTCTGTACGGGTTTCCTGTGCTTGCACAAAGTATTGTCTTTCCTTTGTCTTTTCACATTCATACGAGAATGAATCTTTAGTAAAACATTATGATCAGGTATTGTAAAGATGTGATAGTCCCCATTTTAAAACTACACAGAATGGGGGGAAGGGGGAAACCGGGGGGATCAAGAGATGACAATTTACTACAGGAAACAGTTGTTCGTTGTCATCTTTATCtgcaaataaaagtaaaagttgCCTAGAGTGTATCCATTACTTTCCATCTGTCAGAATAGCATAtattaaaagtgcaaaaatgtattttgtaacaatCAGTTATAAATTGTATCTATGTAGccttctattttctttttaaaccatCTTTGTTACTTAATTTCTcgatcagaaaaaaaaagagggggCCTTTGAACACTTACAACATGccaatgtacaaaaaaaaaaaaaaaaaaaaaaaaaaaggatgaaaatgAAAGCCACTGTTTTTGTAATTCAGAGTACTGAATGTTCCAGAATCCCCCTGTTCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158942 True 686 lncRNA 0.33 2 5943386 5949894

Neighbor

gene id symbol gene type direction distance location
AMCG00000865 NA coding downstream 19680 5922771 ~ 5923706 (-)
AMCG00000863 NA coding downstream 50632 5860845 ~ 5892754 (-)
AMCG00000864 NA coding downstream 87099 5822538 ~ 5856287 (-)
AMCG00000861 ralba,ralb,LOC107746258,LOC107597482 coding downstream 131504 5799381 ~ 5811882 (-)
AMCG00000860 inhbb,LOC106575190,LOC108411664,LOC106574263,LOC105019970,LOC108270543 coding downstream 153607 5782352 ~ 5789779 (-)
AMCG00000866 NA coding upstream 35210 5985104 ~ 6010417 (-)
AMCG00000875 LOC107725256,LOC103367750,LOC106582396,LOC107684456 coding upstream 177525 6127419 ~ 6142577 (-)
AMCG00000874 NA coding upstream 248697 6198591 ~ 6211393 (-)
AMCG00000873 LOC107710929 coding upstream 304006 6253900 ~ 6289579 (-)
AMCG00000880 NA coding upstream 390458 6340352 ~ 6356387 (-)
G126698 NA non-coding downstream 371253 5569944 ~ 5572133 (-)
G126665 NA non-coding downstream 479334 5462567 ~ 5464052 (-)
G126631 NA non-coding downstream 570927 5372249 ~ 5372459 (-)
G126563 NA non-coding downstream 824350 5116054 ~ 5119036 (-)
G126554 NA non-coding downstream 908689 5013868 ~ 5034697 (-)
G126873 NA non-coding upstream 384819 6334713 ~ 6335866 (-)
G126887 NA non-coding upstream 431069 6380963 ~ 6381248 (-)
G126977 NA non-coding upstream 1170350 7120244 ~ 7125041 (-)
G127145 NA non-coding upstream 2688702 8638596 ~ 8639883 (-)
G127159 NA non-coding upstream 2814219 8764113 ~ 8764392 (-)
G126700 NA other downstream 370359 5572705 ~ 5573027 (-)
AMCG00000838 cacnb4,LOC108434427 other downstream 960735 4957138 ~ 4982651 (-)
G126427 NA other downstream 1306870 4636096 ~ 4636516 (-)
AMCG00000804 NA other downstream 2286825 3553047 ~ 3656561 (-)
G126096 NA other downstream 2794134 3131714 ~ 3149252 (-)
AMCG00000888 LOC102209482 other upstream 739674 6689568 ~ 6733817 (-)
G127039 LOC100136012,LOC107575789 other upstream 1680021 7629915 ~ 7645722 (-)
G127292 NA other upstream 3469102 9418996 ~ 9419325 (-)
G127443 NA other upstream 4324793 10274687 ~ 10278211 (-)
AMCG00000960 NA other upstream 4746962 10696856 ~ 10700364 (-)

Expression


Co-expression Network