G126805


Basic Information

Item Value
gene id G126805
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 6213182 ~ 6213407 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU158992
ctgatctggaaaagctcctctgtttgatgtggtcaatgcctttcatgattttgaagacttgaatcaagtccccacgtagtctcctctgttccagggtgaaaaggttcaggtccctcagtctctcagtaggacattcccttcagacctggaataagtctggttgctctcctctgaactgcctctagagcagcgatatctttcttgaagtgtggagcccagaactgtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158992 True 226 lncRNA 0.48 1 6213182 6213407

Neighbor

gene id symbol gene type direction distance location
AMCG00000869 NA coding upstream 14659 6194058 ~ 6198523 (+)
AMCG00000872 NA coding upstream 19391 6189970 ~ 6193791 (+)
AMCG00000867 acmsd,LOC107555338,LOC107723660 coding upstream 24120 6181905 ~ 6189062 (+)
AMCG00000868 mgat5,LOC103369129,LOC106575089 coding upstream 92901 6083991 ~ 6120281 (+)
AMCG00000862 LOC107551943,LOC108430494,LOC107663912,LOC107733654 coding upstream 263878 5939611 ~ 5949304 (+)
AMCG00000871 NA coding downstream 4973 6218380 ~ 6221405 (+)
AMCG00000870 rab3gap1,LOC106586310 coding downstream 19122 6232529 ~ 6252770 (+)
AMCG00000878 NA coding downstream 91610 6305017 ~ 6332100 (+)
AMCG00000877 NA coding downstream 121341 6334748 ~ 6340034 (+)
AMCG00000879 NA coding downstream 143687 6357094 ~ 6361025 (+)
G126782 NA non-coding upstream 7149 6203698 ~ 6206033 (+)
G126781 map3k19,LOC106586307 non-coding upstream 11577 6200909 ~ 6201605 (+)
G126714 NA non-coding upstream 413547 5719268 ~ 5799635 (+)
G126697 NA non-coding upstream 641250 5569970 ~ 5571932 (+)
G126667 NA non-coding upstream 745654 5466982 ~ 5467528 (+)
G126886 NA non-coding downstream 167567 6380974 ~ 6381195 (+)
G126919 epc2,LOC106586324 non-coding downstream 460205 6673612 ~ 6674227 (+)
G126898 NA non-coding downstream 472022 6685429 ~ 6748609 (+)
G126982 NA non-coding downstream 1017946 7231353 ~ 7254142 (+)
G127033 NA non-coding downstream 1396210 7609617 ~ 7613856 (+)
AMCG00000848 NA other upstream 747201 5461301 ~ 5465981 (+)
AMCG00000734 NA other upstream 4399025 1805407 ~ 1814157 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other upstream 4514609 1668845 ~ 1698573 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other upstream 4607151 1599696 ~ 1606031 (+)
G125561 NA other upstream 5809591 339640 ~ 403591 (+)
G127134 NA other downstream 2403792 8617199 ~ 8620195 (+)
AMCG00000949 NA other downstream 3886876 10100283 ~ 10154187 (+)
AMCG00001002 myo3b other downstream 5786257 11999664 ~ 12011425 (+)
AMCG00001022 NA other downstream 6075543 12288950 ~ 12385042 (+)
AMCG00001098 NA other downstream 8936868 15150275 ~ 15184392 (+)

Expression


Co-expression Network