G126886



Basic Information


Item Value
gene id G126886
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 6380974 ~ 6381195 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU159107
gtaatttcctggctcagttttgtcccctttcttgtggattggtttgacatttgctgtcttccagtcagttggcacatcccctgttctaagtgtcatttggaatatttgagttagcggcctataaataatttacctaatttctttaagtactgttggaaatataccatctggcccaggtgatttgttggtttttaattctgctagtccctttagtacctcctc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU159107 True 222 lncRNA 0.40 1 6380974 6381195

Neighbor


gene id symbol gene type direction distance location
AMCG00000876 NA coding upstream 15704 6362207 ~ 6365270 (+)
AMCG00000879 NA coding upstream 19949 6357094 ~ 6361025 (+)
AMCG00000877 NA coding upstream 40940 6334748 ~ 6340034 (+)
AMCG00000878 NA coding upstream 48874 6305017 ~ 6332100 (+)
AMCG00000870 rab3gap1,LOC106586310 coding upstream 128204 6232529 ~ 6252770 (+)
AMCG00000881 rnd3,LOC108425727 coding downstream 37687 6418882 ~ 6426938 (+)
AMCG00000882 NA coding downstream 150806 6532001 ~ 6541611 (+)
AMCG00000884 orc4,LOC107577955 coding downstream 352612 6733807 ~ 6743970 (+)
AMCG00000890 NA coding downstream 907088 7288283 ~ 7307656 (+)
AMCG00000891 NA coding downstream 962675 7343870 ~ 7346591 (+)
G126805 NA non-coding upstream 167567 6213182 ~ 6213407 (+)
G126782 NA non-coding upstream 174941 6203698 ~ 6206033 (+)
G126781 map3k19,LOC106586307 non-coding upstream 179369 6200909 ~ 6201605 (+)
G126714 NA non-coding upstream 581339 5719268 ~ 5799635 (+)
G126697 NA non-coding upstream 809042 5569970 ~ 5571932 (+)
G126919 epc2,LOC106586324 non-coding downstream 292417 6673612 ~ 6674227 (+)
G126898 NA non-coding downstream 304234 6685429 ~ 6748609 (+)
G126982 NA non-coding downstream 850158 7231353 ~ 7254142 (+)
G127033 NA non-coding downstream 1228422 7609617 ~ 7613856 (+)
G127038 LOC100136012 non-coding downstream 1248707 7629902 ~ 7645720 (+)
AMCG00000848 NA other upstream 914993 5461301 ~ 5465981 (+)
AMCG00000734 NA other upstream 4566817 1805407 ~ 1814157 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other upstream 4682401 1668845 ~ 1698573 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other upstream 4774943 1599696 ~ 1606031 (+)
G125561 NA other upstream 5977383 339640 ~ 403591 (+)
G127134 NA other downstream 2236004 8617199 ~ 8620195 (+)
AMCG00000949 NA other downstream 3719088 10100283 ~ 10154187 (+)
AMCG00001002 myo3b other downstream 5618469 11999664 ~ 12011425 (+)
AMCG00001022 NA other downstream 5907755 12288950 ~ 12385042 (+)
AMCG00001098 NA other downstream 8769080 15150275 ~ 15184392 (+)

Expression



Co-expression Network