Gene
RNA
| Item | Value |
|---|---|
| gene id | G127039 |
| gene name | LOC100136012,LOC107575789 |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030137.1 |
| NCBI id | CM030137.1 |
| chromosome length | 27060302 |
| location | 7629915 ~ 7645722 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU159288 | True | 464 | TUCP | 0.48 | 2 | 7629915 | 7645722 |
| TU159291 | False | 454 | lncRNA | 0.48 | 2 | 7629915 | 7645722 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000896 | NA | coding | downstream | 11511 | 7603257 ~ 7618404 (-) |
| AMCG00000898 | NA | coding | downstream | 175541 | 7371920 ~ 7454374 (-) |
| AMCG00000889 | acvr2a,LOC103040899,LOC105016248,LOC106586327 | coding | downstream | 877451 | 6748327 ~ 6752464 (-) |
| AMCG00000885 | NA | coding | downstream | 951809 | 6665302 ~ 6678106 (-) |
| AMCG00000887 | LOC105022551,LOC103370269 | coding | downstream | 967419 | 6624257 ~ 6662496 (-) |
| AMCG00000897 | spopl,LOC107658226 | coding | upstream | 573114 | 8218836 ~ 8232120 (-) |
| AMCG00000900 | NA | coding | upstream | 644504 | 8290226 ~ 8296028 (-) |
| AMCG00000899 | NA | coding | upstream | 662163 | 8307885 ~ 8316601 (-) |
| AMCG00000901 | NA | coding | upstream | 682275 | 8327997 ~ 8345029 (-) |
| AMCG00000902 | NA | coding | upstream | 767721 | 8413443 ~ 8426125 (-) |
| G126977 | NA | non-coding | downstream | 504874 | 7120244 ~ 7125041 (-) |
| G126887 | NA | non-coding | downstream | 1248667 | 6380963 ~ 6381248 (-) |
| G126873 | NA | non-coding | downstream | 1294049 | 6334713 ~ 6335866 (-) |
| G126767 | NA | non-coding | downstream | 1680021 | 5943386 ~ 5949894 (-) |
| G126698 | NA | non-coding | downstream | 2057782 | 5569944 ~ 5572133 (-) |
| G127145 | NA | non-coding | upstream | 992874 | 8638596 ~ 8639883 (-) |
| G127159 | NA | non-coding | upstream | 1118391 | 8764113 ~ 8764392 (-) |
| G127229 | NA | non-coding | upstream | 1421118 | 9066840 ~ 9083586 (-) |
| G127275 | NA | non-coding | upstream | 1712626 | 9358348 ~ 9360596 (-) |
| G127291 | NA | non-coding | upstream | 1762471 | 9408193 ~ 9408469 (-) |
| AMCG00000888 | LOC102209482 | other | downstream | 896098 | 6689568 ~ 6733817 (-) |
| G126700 | NA | other | downstream | 2056888 | 5572705 ~ 5573027 (-) |
| AMCG00000838 | cacnb4,LOC108434427 | other | downstream | 2647264 | 4957138 ~ 4982651 (-) |
| G126427 | NA | other | downstream | 2993399 | 4636096 ~ 4636516 (-) |
| AMCG00000804 | NA | other | downstream | 3973354 | 3553047 ~ 3656561 (-) |
| G127292 | NA | other | upstream | 1773274 | 9418996 ~ 9419325 (-) |
| G127443 | NA | other | upstream | 2628965 | 10274687 ~ 10278211 (-) |
| AMCG00000960 | NA | other | upstream | 3051134 | 10696856 ~ 10700364 (-) |
| AMCG00001041 | cir1,si:ch73-167c12.2 | other | upstream | 5051455 | 12697177 ~ 12703910 (-) |
| AMCG00001039 | NA | other | upstream | 5079972 | 12725694 ~ 12732601 (-) |
