G127091


Basic Information

Item Value
gene id G127091
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 8288789 ~ 8289806 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU159352
TTCAGTATAGGAATACATTGGCAGGCTTAGACGGTGCAAAGTTTTTACTCCCAAGCTGAAAATAGATCCCAATAGAGTTTATTGTGTGTATAGAAATGGGATATTGATCAATCTCCAGCCAGGGAGTAGTAATCTTCACAAGCTAAACGTTTTTCCAGGGTCTTTCAAGATGCTTGTGCTGTGAATCTGCTCTAAATGggataatatgtaaaatattcagGACTATGATGAATGCTCTTTTACTAGGCAGACAGAAACTGGTCTTTGGTCTGTCTTTGTTGTTGATTCTGCTGGCTTGCCGTTCACATAGCAGTGTAACATGATTTTAAAGTCTTCGGTGTTGATGTGCACAGGTTGTCTTCCTacagctgatgatgatgatggggTTCTTGCATATGGTCAAAGCTGCTTATGGTACCCAAAATGTTAGCCAACATTTGAGTTCCTCTACAAAATGCACTGGTCAATAGGTTGGCAGGCAAAGTCACTATACATAGTGTAACCTCTCCAAATATGCAAAAAGTAATATTGACTTGGAATCTGTTGACCCAGGTTACAGTCCAGCTGTGTTAAAAGTGAAAGAGTGCTGATGTGTATTTGCAGGGACTCCTTACAGTTGTGTCCCAATATATGGACTCCTGACCTCTGCTGGTTTGGGGTTGTAATTTCTCAAAATGTATCCATGTTCTACCATGGGCTAAACTGCAGCAGCAAGTGAATTCAAGGTCACAGCCCGGTGCTAAAATTCTGTTacagtatttagtttttttgttgttgtttttttacagctaTCTCATAGTATTTGTCTTGAAAGTAAAAATACTAGTTTTGTCAAAGAGATAGATGTGCAGCTGAGACATGAAATATCACAGTCTGATTTAGGGTGCTGACTGAACAGTGTttaaataatagtagtagttttTCACAAACAtctctgaatacatttaataaagtgtATTCTCTTCAGTAAAGAGTATATTTGATTTGACCTTGCaagaatatactttttttacattca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU159352 True 1018 lncRNA 0.38 1 8288789 8289806

Neighbor

gene id symbol gene type direction distance location
AMCG00000908 si:ch211-246m6.4,LOC107565497,LOC107656681,LOC107600970,LOC107751464,LOC107739350,LOC107653571,LOC107600989,LOC102786361 coding upstream 104764 8182377 ~ 8184025 (+)
AMCG00000906 NA coding upstream 124803 8112982 ~ 8163986 (+)
AMCG00000894 LOC107746259,LOC107714450,LOC106586434 coding upstream 227582 7977159 ~ 8061207 (+)
AMCG00000895 NA coding upstream 312736 7957849 ~ 7976053 (+)
AMCG00000893 NA coding upstream 346383 7860066 ~ 7942406 (+)
AMCG00000907 NA coding downstream 285034 8574840 ~ 8575310 (+)
AMCG00000903 dars,LOC107676220 coding downstream 300862 8590668 ~ 8608633 (+)
AMCG00000904 mcm6,LOC107748580,LOC107705596,LOC107688862 coding downstream 319794 8609600 ~ 8616534 (+)
AMCG00000905 NA coding downstream 338775 8628581 ~ 8635880 (+)
AMCG00000910 NA coding downstream 351868 8641674 ~ 8645197 (+)
G127038 LOC100136012 non-coding upstream 643069 7629902 ~ 7645720 (+)
G127033 NA non-coding upstream 674933 7609617 ~ 7613856 (+)
G126982 NA non-coding upstream 1034647 7231353 ~ 7254142 (+)
G126898 NA non-coding upstream 1540180 6685429 ~ 6748609 (+)
G126919 epc2,LOC106586324 non-coding upstream 1614562 6673612 ~ 6674227 (+)
G127096 NA non-coding downstream 4712 8294518 ~ 8294873 (+)
G127144 NA non-coding downstream 348790 8638596 ~ 8639823 (+)
G127206 NA non-coding downstream 791521 9081327 ~ 9082881 (+)
G127278 NA non-coding downstream 1073301 9363107 ~ 9377589 (+)
G127509 NA non-coding downstream 2153187 10442993 ~ 10444937 (+)
AMCG00000848 NA other upstream 2822808 5461301 ~ 5465981 (+)
AMCG00000734 NA other upstream 6474632 1805407 ~ 1814157 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other upstream 6590216 1668845 ~ 1698573 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other upstream 6682758 1599696 ~ 1606031 (+)
G125561 NA other upstream 7885198 339640 ~ 403591 (+)
G127134 NA other downstream 327393 8617199 ~ 8620195 (+)
AMCG00000949 NA other downstream 1810477 10100283 ~ 10154187 (+)
AMCG00001002 myo3b other downstream 3709858 11999664 ~ 12011425 (+)
AMCG00001022 NA other downstream 3999144 12288950 ~ 12385042 (+)
AMCG00001098 NA other downstream 6860469 15150275 ~ 15184392 (+)

Expression


Co-expression Network