G127145


Basic Information

Item Value
gene id G127145
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 8638596 ~ 8639883 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU159409
TTTAAAGATTATcgtaattatttttattctttacagaATTAAAATCGTTTTTTCAGTACCTTTAAAGttcaaacaaatgtacaaaaaaatacaaaggaaTGTTGTCTCTGGCACCCAAAATGTCACTCTATAACTCTATTGGTAGCTCAAGAAGTACCATGTAAAATAGTTTAGGGGATAAACAGAGATATTTAATAATCATACTTAGACAGCATATATGTCTTTCTGTATGCCatgttaaaagtatttaaatacattattctattCAGTCAAATGTAGgattaaattaagttaatgtGTTTTGGTAGTCTCTCACAAACATTCACCACACACAAAATCTGATCTTCACTGAATACTGAAATACTTTGAGGTCAGATGAAGAGAAGTGCTTTTGAGTTGAGTTTTGAGCTTATCAAAATCTACTGgatcaatctttatttttaaatgtagggTACCCTTGAACCTTGCAGTTGTGAACACAGTTAATGTATGTCttagcagacaaccttatccagaGATCACTTACAATTGTTCCAGTATGTCACATTATTGTTTTACCTACagtgaaatacatacatttgaacccatgaccctcaatgcaggagtccagagccctaaccactactccacactgctgcccaggtTCAATTATCACACGCACACTTCACTTTTCTGCGTTTAAACTAGGGAGAACCATACTTAAGCCAGgattaacattaatatattatcaGTAGTTTGTTAACTTTGCAAACCCAGTGTTTccagtataacaaaatatttgtattttacagaattTTAAACTGACCCTACAGTCTAAGTAACTTTAGGAATATATCGGTTTCATAAAGTAGTATACATTAATCACTTTTTAACACTTAAAAGCATGACAACaatctatacaaaataatttcttCATTTGTAATATACTTCACATACTAAATAACTttgctctgtatttaaaaacattagcaGCTACTCAATCTCACGGTGTATTGTGTATCccgtttgtttaattaaatcagttcCATGTTCTCAGCTCCACAGATCACAGCATGCAGAAAATGTCAACTCATAATATCCATGTACCcttattttttgtgtcatttaaaGTTAATGTGGAGTTTTCTTGCTCATGAAAGATAAATACCATTCCACAGGAATCACTTAAaacttaagaaacataagaaagtttacaaacgagaggaggcattcgacccatcgtgcttgtttggtatccattaataactaagtgatccaagcatcctatccagtctatttttaaatgttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU159409 True 1288 lncRNA 0.33 1 8638596 8639883

Neighbor

gene id symbol gene type direction distance location
AMCG00000909 NA coding downstream 13245 8617271 ~ 8625351 (-)
AMCG00000902 NA coding downstream 212471 8413443 ~ 8426125 (-)
AMCG00000901 NA coding downstream 293567 8327997 ~ 8345029 (-)
AMCG00000899 NA coding downstream 321995 8307885 ~ 8316601 (-)
AMCG00000900 NA coding downstream 342568 8290226 ~ 8296028 (-)
AMCG00000916 NA coding upstream 14119 8654002 ~ 8661631 (-)
AMCG00000917 NA coding upstream 22234 8662117 ~ 8664221 (-)
AMCG00000914 chpf,LOC106581838 coding upstream 250343 8890226 ~ 8900361 (-)
AMCG00000915 NA coding upstream 262352 8902235 ~ 8908000 (-)
AMCG00000923 cdk5r2a,LOC107748545,LOC107660098,LOC107566326,LOC107566799,LOC107705611 coding upstream 363266 9003149 ~ 9044874 (-)
G126977 NA non-coding downstream 1513555 7120244 ~ 7125041 (-)
G126887 NA non-coding downstream 2257348 6380963 ~ 6381248 (-)
G126873 NA non-coding downstream 2302730 6334713 ~ 6335866 (-)
G126767 NA non-coding downstream 2688702 5943386 ~ 5949894 (-)
G126698 NA non-coding downstream 3066463 5569944 ~ 5572133 (-)
G127159 NA non-coding upstream 124230 8764113 ~ 8764392 (-)
G127229 NA non-coding upstream 426957 9066840 ~ 9083586 (-)
G127275 NA non-coding upstream 718465 9358348 ~ 9360596 (-)
G127291 NA non-coding upstream 768310 9408193 ~ 9408469 (-)
G127300 NA non-coding upstream 816088 9455971 ~ 9468876 (-)
G127039 LOC100136012,LOC107575789 other downstream 992874 7629915 ~ 7645722 (-)
AMCG00000888 LOC102209482 other downstream 1904779 6689568 ~ 6733817 (-)
G126700 NA other downstream 3065569 5572705 ~ 5573027 (-)
AMCG00000838 cacnb4,LOC108434427 other downstream 3655945 4957138 ~ 4982651 (-)
G126427 NA other downstream 4002080 4636096 ~ 4636516 (-)
G127292 NA other upstream 779113 9418996 ~ 9419325 (-)
G127443 NA other upstream 1634804 10274687 ~ 10278211 (-)
AMCG00000960 NA other upstream 2056973 10696856 ~ 10700364 (-)
AMCG00001041 cir1,si:ch73-167c12.2 other upstream 4057294 12697177 ~ 12703910 (-)
AMCG00001039 NA other upstream 4085811 12725694 ~ 12732601 (-)

Expression


Co-expression Network