G127631


Basic Information

Item Value
gene id G127631
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 10757870 ~ 10759494 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU160019
tgtatacaatatctgtttattgttttgtgttgacataaaaaatacacataaaatcCATTAATATTCAATAAACAACAATTTGTACTTTGTTATAAACATTggcaatattttgtatttgtcactGTTACATATAACATTAGGTAGCaagtgaaaaagaacaaaacatatgCTGATAGGATTTTATATAGttcacattctttttttatcattaacaTACAGCAGACAATATATGTTGGGAAACCCCTTTTGGTGCGTTTCTCCACGGGGAAAGAAAAACTTCCTCTTGAAACATCGATTAATAAGACCATTACTTCAGTATTCATTTTCTAAATGTGAActaacaattacaaattacatgttgtgGGGGcttgttttttgtgaaaataacagagaaaacaagaccaataatatgaaacgattttatattagaaaattcccttttaaaatgaattaaattgtttctttctcttctttcatATGATATGATAGAATCACCTTTATAAAAAGGGTGTTTTGACTCTCTCAGCTGTTAGCTTACagttgtgtattgtgttgtataggGAATTCATATAACTAAATAGCCCACCTCATGAGGTACCGCAATCTTTTAAGATGATATAACTTTTATCAAAGTGTTTGGAACTATCAGGACTGATATTACTAGCAAGgccaaaacacacatttatttacctAAAAGGGAGGACATAACAGGTTGCAGTAATTTGgcaaaagaacaaaatgtatataatactgTTCTTATCAGCAGTTTCATTATAAACATAACCAAGACATGACGTATGCCCTTTTTTCGATGAACATTTATCACAATCAAAGTtaggtatatattttgtactagTCAGGTGACCTTGTATGCTTTAAAACATGCCTTGTGAGTAGTTCTCATTCTGGATTATgtcttaaacaaaataaaacaatacaaatgccCATTACATAGTTTTTCTTGTTGATTggacttgttttttaaaataaaaaaacattcttctgGCACATATTTTACCACACAAACAGCAGTTGGGGTCCTTAAGCCATGAGTCCAGTTAGTTGGATTCCCTTGATGGCTATTCTGTATCCATTTTAAATTCTTGCTTCCATGATAGTCATCAAAAAAAATCCTGCCATTCTTGCTGTAGCGTTTTATAATACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160019 True 1165 lncRNA 0.31 2 10757870 10759494

Neighbor

gene id symbol gene type direction distance location
AMCG00000963 NA coding downstream 5802 10749030 ~ 10752068 (-)
AMCG00000962 NA coding downstream 20594 10725849 ~ 10737276 (-)
AMCG00000961 NA coding downstream 33988 10702960 ~ 10723882 (-)
AMCG00000956 LOC107561566 coding downstream 243613 10489430 ~ 10514257 (-)
AMCG00000954 NA coding downstream 281338 10469429 ~ 10476532 (-)
AMCG00000964 NA coding upstream 3476 10762970 ~ 10807821 (-)
AMCG00000965 LOC107600684,LOC107677922,LOC107087272 coding upstream 80619 10840113 ~ 10841698 (-)
AMCG00000968 NA coding upstream 172058 10931552 ~ 10933795 (-)
AMCG00000970 NA coding upstream 317618 11077112 ~ 11100449 (-)
AMCG00000969 NA coding upstream 376230 11135724 ~ 11155356 (-)
G127573 NA non-coding downstream 141643 10615930 ~ 10616227 (-)
G127555 NA non-coding downstream 191221 10564927 ~ 10566649 (-)
G127478 NA non-coding downstream 361944 10391304 ~ 10395926 (-)
G127420 NA non-coding downstream 606936 10147775 ~ 10150934 (-)
G127346 NA non-coding downstream 927180 9824796 ~ 9830690 (-)
G127678 NA non-coding upstream 449047 11208541 ~ 11247944 (-)
G127718 NA non-coding upstream 637216 11396710 ~ 11407860 (-)
G127740 NA non-coding upstream 846310 11605804 ~ 11606176 (-)
G127742 NA non-coding upstream 849777 11609271 ~ 11609630 (-)
G127743 NA non-coding upstream 850749 11610243 ~ 11611612 (-)
AMCG00000960 NA other downstream 57506 10696856 ~ 10700364 (-)
G127443 NA other downstream 479659 10274687 ~ 10278211 (-)
G127292 NA other downstream 1338545 9418996 ~ 9419325 (-)
G127039 LOC100136012,LOC107575789 other downstream 3112148 7629915 ~ 7645722 (-)
AMCG00000888 LOC102209482 other downstream 4024053 6689568 ~ 6733817 (-)
AMCG00001041 cir1,si:ch73-167c12.2 other upstream 1937683 12697177 ~ 12703910 (-)
AMCG00001039 NA other upstream 1966200 12725694 ~ 12732601 (-)
G128160 wipf1 other upstream 1972690 12732184 ~ 12751516 (-)
AMCG00001061 cycsb,LOC108273362,LOC108430847,LOC107740584 other upstream 2597489 13356983 ~ 13359770 (-)
AMCG00001068 LOC107576050 other upstream 3008047 13767541 ~ 13773878 (-)

Expression


Co-expression Network