Gene
RNA
| Item | Value |
|---|---|
| gene id | G127740 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030137.1 |
| NCBI id | CM030137.1 |
| chromosome length | 27060302 |
| location | 11605804 ~ 11606176 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU160154 | True | 373 | lncRNA | 0.36 | 1 | 11605804 | 11606176 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000979 | stk39,LOC106586202 | coding | downstream | 49683 | 11538485 ~ 11556121 (-) |
| AMCG00000978 | NA | coding | downstream | 84087 | 11518511 ~ 11521717 (-) |
| AMCG00000977 | csrnp3,LOC107677900 | coding | downstream | 295791 | 11302327 ~ 11310013 (-) |
| AMCG00000971 | NA | coding | downstream | 415603 | 11181932 ~ 11190201 (-) |
| AMCG00000969 | NA | coding | downstream | 450448 | 11135724 ~ 11155356 (-) |
| AMCG00000988 | NA | coding | upstream | 5727 | 11611903 ~ 11614988 (-) |
| AMCG00000987 | abcb11b,abcb11,LOC105911976,LOC107692229,LOC107602798,LOC108438644,LOC108270741 | coding | upstream | 18915 | 11625091 ~ 11655006 (-) |
| AMCG00000992 | lrp2 | coding | upstream | 68910 | 11675086 ~ 11733640 (-) |
| AMCG00000991 | atp5b,LOC102199207 | coding | upstream | 135185 | 11741361 ~ 11746181 (-) |
| AMCG00000999 | NA | coding | upstream | 189223 | 11795399 ~ 11802453 (-) |
| G127718 | NA | non-coding | downstream | 197944 | 11396710 ~ 11407860 (-) |
| G127678 | NA | non-coding | downstream | 357860 | 11208541 ~ 11247944 (-) |
| G127631 | NA | non-coding | downstream | 846310 | 10757870 ~ 10759494 (-) |
| G127573 | NA | non-coding | downstream | 989577 | 10615930 ~ 10616227 (-) |
| G127555 | NA | non-coding | downstream | 1039155 | 10564927 ~ 10566649 (-) |
| G127742 | NA | non-coding | upstream | 3095 | 11609271 ~ 11609630 (-) |
| G127743 | NA | non-coding | upstream | 4067 | 11610243 ~ 11611612 (-) |
| G127747 | NA | non-coding | upstream | 9281 | 11615457 ~ 11618105 (-) |
| G127899 | NA | non-coding | upstream | 302810 | 11908986 ~ 11911822 (-) |
| G127976 | NA | non-coding | upstream | 548332 | 12154508 ~ 12158483 (-) |
| AMCG00000960 | NA | other | downstream | 905440 | 10696856 ~ 10700364 (-) |
| G127443 | NA | other | downstream | 1327593 | 10274687 ~ 10278211 (-) |
| G127292 | NA | other | downstream | 2186479 | 9418996 ~ 9419325 (-) |
| G127039 | LOC100136012,LOC107575789 | other | downstream | 3960082 | 7629915 ~ 7645722 (-) |
| AMCG00000888 | LOC102209482 | other | downstream | 4871987 | 6689568 ~ 6733817 (-) |
| AMCG00001041 | cir1,si:ch73-167c12.2 | other | upstream | 1091001 | 12697177 ~ 12703910 (-) |
| AMCG00001039 | NA | other | upstream | 1119518 | 12725694 ~ 12732601 (-) |
| G128160 | wipf1 | other | upstream | 1126008 | 12732184 ~ 12751516 (-) |
| AMCG00001061 | cycsb,LOC108273362,LOC108430847,LOC107740584 | other | upstream | 1750807 | 13356983 ~ 13359770 (-) |
| AMCG00001068 | LOC107576050 | other | upstream | 2161365 | 13767541 ~ 13773878 (-) |
