G128160 (wipf1)


Basic Information

Item Value
gene id G128160
gene name wipf1
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 12732184 ~ 12751516 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU160686
GTGAAGGTCCCGGATCTGGGAGAAGCACAAGTTTCTCCGCAGACACACAAGCTATAAATAGCTTCACTCGGAGGAAAATGCCCCGTTTGCAAAAGCAGTAAAGACTCCATCACCTAACGGGAtgtaagaaaactgaaaacaaaagaaacccaaACAGGAGTGAGAAGTTGAGAAGGAATATCAAGGACAGAAGATGCCAGTTCCtccgcccccgcccccgcccgCTGCGCCCCCTCCACCCACCTTTGCATTGGCCAATACAGAAAAACCTCCTCTGACCAAGTCTGGACAACAGAGTAGGAGTGCTCTGTTGTCGGATATTTCAAAAGGAGCAAGATTAAAGAAGACTGTGACAAATGACAGAAGTGCTCCAGTATTTGAAAagcCCAAGGGCTcaggggggggaggaggaggtggcgGCGGCGGTGGCGGTGGCGGTGGTGGCGGCGGTGGGGGAGGAGCTCCAGGTGGACTCGGAGGTCTCTTCCAAGGTGGGATGCCGAAGCTGCGGTCTGCGGGGAACCGGGAGAGCGGTGACTCTGGTGGGGGGAGACCCCCAATGCTGCCTCCGGGAGGACGAGCAACCTCAGCCAGGCCCTTTGGGGGGAGCTCTGCCTCCGCGTCCCGGTTTCCAGGTGCACCCCCTTCTGTACCGAGGAGCGGTGCCCCTGAGCTACCCCGAGGCCGCGTGACTCCGCCCCGGCCAGAGATGGGGGGTGGGCCGCCTCCTGTGCCCAGCACCCCCCGGCCTCCCCAAGGGGGCTTCCAGAACAGAGGCCCACCACCCCTGCCAGGAGGAGGCCGCCCCCCCAGCTCCAGCCCgggccccccacccccagccctgCCAGGAGGAGGCCGCCCCCCCAGCTCCAGCCCGGGCCCCCCAGCCCTGCCAGGAGGAGGCCGCAACCTCGGCTCCAGCCCGGGCCCACCACCCCCATCTCTACCAGGAGGAGGCCGCCCCTCCAGCTCCAGCCTGggccccccaccaccctcctTGCCAGGCAGGAATCAGGGCCCGCCGCCTGTGCCTGGGGGCAACGCCTTCCCTCGGCAGCCCTCTTTCTCGAACACCCCCGTGCCCAGCTCTGGCcgccctcctctccctcccgcCCCTGGCAGGTCCT

Function

symbol description
wipf1 Enables SH3 domain binding activity. Predicted to be involved in actin filament-based movement. Predicted to act upstream of or within response to other organism. Predicted to be located in actin cytoskeleton and cytosol. Predicted to be active in actin filament.

NR:

description
PREDICTED: WAS/WASL-interacting protein family member 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160686 True 1127 TUCP 0.65 5 12732184 12751516

Neighbor

gene id symbol gene type direction distance location
AMCG00001040 NA coding downstream 10505 12705465 ~ 12721679 (-)
AMCG00001030 ola1,LOC105019904 coding downstream 52756 12676022 ~ 12679428 (-)
AMCG00001032 ola1,LOC107660044 coding downstream 73795 12652611 ~ 12658389 (-)
AMCG00001034 ola1,LOC107677584 coding downstream 90202 12636744 ~ 12641982 (-)
AMCG00001031 NA coding downstream 114229 12606362 ~ 12617955 (-)
AMCG00001038 chrna1,LOC106595477 coding upstream 897 12752413 ~ 12760367 (-)
AMCG00001044 chn1,LOC107588230,LOC107600702,LOC100196534,LOC106586243,LOC106581750 coding upstream 14143 12765659 ~ 12777013 (-)
AMCG00001043 chn1,LOC107657347,LOC107742958,LOC107739458 coding upstream 37819 12789335 ~ 12795048 (-)
AMCG00001046 atf2,LOC107671311,LOC107739459 coding upstream 62925 12814441 ~ 12836485 (-)
AMCG00001045 atp5g3,LOC106590033,LOC105007245 coding upstream 85926 12837442 ~ 12841125 (-)
G128070 NA non-coding downstream 236969 12493178 ~ 12495215 (-)
G128045 NA non-coding downstream 344600 12358559 ~ 12387584 (-)
G127976 NA non-coding downstream 573701 12154508 ~ 12158483 (-)
G127899 NA non-coding downstream 820362 11908986 ~ 11911822 (-)
G127747 NA non-coding downstream 1114079 11615457 ~ 11618105 (-)
G128155 NA non-coding upstream 13396 12764912 ~ 12810017 (-)
G128191 NA non-coding upstream 248066 12999582 ~ 12999876 (-)
G128212 NA non-coding upstream 313624 13065140 ~ 13070429 (-)
G128237 hnrnpa3 non-coding upstream 455358 13206874 ~ 13211855 (-)
G128242 NA non-coding upstream 496373 13247889 ~ 13280730 (-)
AMCG00001041 cir1,si:ch73-167c12.2 other downstream 28274 12697177 ~ 12703910 (-)
AMCG00000960 NA other downstream 2031820 10696856 ~ 10700364 (-)
G127443 NA other downstream 2453973 10274687 ~ 10278211 (-)
G127292 NA other downstream 3312859 9418996 ~ 9419325 (-)
G127039 LOC100136012,LOC107575789 other downstream 5086462 7629915 ~ 7645722 (-)
AMCG00001061 cycsb,LOC108273362,LOC108430847,LOC107740584 other upstream 605467 13356983 ~ 13359770 (-)
AMCG00001068 LOC107576050 other upstream 1016025 13767541 ~ 13773878 (-)
G128628 NA other upstream 1841183 14592699 ~ 14598570 (-)
G128741 NA other upstream 2427725 15179241 ~ 15180322 (-)
AMCG00001118 hibch other upstream 2612551 15364067 ~ 15433469 (-)

Expression


Co-expression Network