G128212


Basic Information

Item Value
gene id G128212
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 13065140 ~ 13070429 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU160764
TGGTTTTGGGATTATTTCGTTTGATCTTCATCCACTCGAAGGTATTTGCAGTGTTTTGGGTCTCTTCTTGCATTGGTGTGGACTTTGGGTAACTCACTTGAGAAGATGAAAGGTTGGGGTAACTTCCCGAGTAGAACCCACGCAATGTCTTGTTGTTGTGCTTGTATTGGTCTTCCTCGCCAAGATCGTTGAAAGAGGGCTCTCCGTGATTGAGTGGATACGATCCATGTCCCGGGTATACAGATGTGATGTACTGGACATGTGCCCCGCTGTCTTCTGTGTCGTTAGGACATCCGTACGGTAAATCATAACCTATGCCTTGGGCCACATAGTTTAACTCGGCGCTGTTCGTGCTGTTCTCGTAAGGTACTTCCAATGTACTTGGAGGATGCATCCCAGGAGAAACTGCCCGGGTGTTTGAAGGATGATCCAGGGCATTGATACCTATTGGCAGTCTCCCCATAGTGTCGCCAGTCACTGAGTACTGCAGAGGGACAGCCCTGTGCTCAGCATGGCAACATTTTGCAGGCAAAGCTAACACGTCTCCGCTGGAAAAGTAGTCAAAGTACGTATTCATTATTTCTCTTCAATGATCGGCTGCACATGTGAATGATGGCTAGCGTGCTTTTCCTGATTTACTTACTGTACTTTCTTACAGCAAGATGTAAATATTGCCCGCTATGGAGGGGGCGTGGTCACGTGTCTTCGTGGGCCAATCACAGCCCGGCACTCGGGTCCTTCTCGTTTGCGCTTTCGAGGGTTTGCAGGCAGCAGCTGCTAAAACTTTATCAGCGGCAGTCAGATGAGCACTGAATATGTTGCTATTGCCAGGATAACTTTTAAAGTATGCAGAAGTACTACCTCCTTTGGCGGCGAGCTCTGGACGCATCCCAGCTGGCCCTATCCTGCTCGGAAGAGGTGGAACTGCTGTCGAGTACAAACTGCACATTCGGTGATTGATGAAGTCTTAATAATACCCCACTGACAACCGTACTCCCTGGAAGGCCACTTGCCTACTAGTTCTTTCCAACTGCTAATTTCTATGAGAGTTGTTTCCCATCCAAAGAGCACAGTATATGCACAGCGAATGGCAATTgactattaaatatatatacatatcaagTCTGGAAGTGTATGtacagatattttatttgtttataatccTTCACCGTTTACGTCACTATTTCTGGGATTCCGTCACGTGGTTTAGAGACCTGGTTTTGGTTTAACAgcccaaaacaaagaaaagtgtaGGCAGGCCTTTTGTGTGGCTTGCACTATAGCGCAACATTATATAGCTTTGAGCTATTTGGAAAGCAAGTGAAATGTCTGTGAAAATCATCCCACATCATATGAAAacgattttatttatttatttgcaatatgCGATTGTTGCTGTTTTGCTCTTTACAATACAGTTACGCAAAGGCAATAACTATTACAATTGCTTTTATATGAATAACTACATCTCGTCTATTGTTTTCGTGCAAAACCCTTTCTAAAAAAACCGAATTGTTCTTCCattagaattaaaattaaaattaaaatttaatttatgtgtgtatttgtattattattaaatcttagaacattttttttcactttcgTGAACTCTTTTATAATCTTGCCttagctaaataaattaaaattactaCTAGTTTAATATTAACATATGCAAATAGTTTATAATTTAAGCATTTATAGTATTTATCTCAAACAATATTCTACACtgaatacaaattttaatacaattagttgatttgtttattaaatatttattgatttgaacaATTACTACAAACGTGAACATCTCTAAGAAAACATAACAGATCATAAAATGTTCTGTGAAAGCAATAAGTAGTTATGAAACCTTTATagaacacagagaaacacaagaaCACTACAGTATTTAAAGCAGAATTGTGAGGAATTGTTTGGTTGCTGGAGCCTTatcctgtgattttttttttagtgcatGGAATACAAACAATGAGATTATTGCATAATAGATGGAgatagtacatttattttacttttattttctcagcAAATTCTCAAATGTGTATGTCAGAGCCTTTCATTGTGTCAgggaataaataatacatcaatacatttggTGAACTGTAGACATAGGTTTCACGTTTATGTCTTAATTGGTTGTGTTTGCTTGCATATGATATCTTTATGTTAGTGACAACTATCTCCGGTTGTGTTCGCATCCATTTGTATGGTACATCCACTTGAAATGGacgtgttttgatttatttctttaaaattgcATTGTATACAAGGTTGTGCTGGTCAGGAAAGTGTTTAAGGAATAGCATTGAAAGCGTGTTATGTATACAGCCATATTTATTGTGAGATACATATCTTTGCTCacaactgaatttaaaattgCAGCTGTTGGAAATCTGttgtacaaatattttcaattaaaatattaaacgcATCTACATCGTTATTGGTTGTGTCGGTTTCAGTTAATGAAAATGAGGGTTCTGCTGTGAAAAGGTCGATTGAAATTGTATCTAAATCCTCCAAAGAAAGTATATTGAAACTGTCCACAGCAAATGACAAGGTCTTCAAGTTTGCCAAAGAGCAACTTTTGTCGCTGGAAACGAGAAACTCGTCATCACTTTGGTTTCCAGAAAACGAAGACAGTTCCATCAGTATCTTTTCTTGGTGTGGTCCATCCTTTTCGGTTTGCTCAAAATCTGTCTCCTCTAAAGCAACCTTGTCCAGGATTGTCTGTGATTGCCCACTATAAAAGACACTGTTGACACAACCACTGCTTACAATGCCTTTGGAATCAAGTATTTTCCCTTGTTTGAACCGGGATTGTCTTTTATGCTTCATTCGTCTGTTTTGAAACCAGACTTTGACTTGTCTTTCAGTTAAATCTAGAAGAGATGCAATTTCTATTCTCCTTGGTCTGCAAAGGTACCTGTTATAATGAAACTCCTTCTCTAATTCCAATAGCTGAGTATTAGTGTATGTTGTGCGGAGTCTTCTGTGAAGAGGACTACCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160764 True 3032 lncRNA 0.38 2 13065140 13070429

Neighbor

gene id symbol gene type direction distance location
AMCG00001051 evx2,evx2a,LOC107657379,LOC107671304 coding downstream 75258 12987035 ~ 12989882 (-)
AMCG00001048 lnpb coding downstream 90954 12959942 ~ 12974186 (-)
AMCG00001045 atp5g3,LOC106590033,LOC105007245 coding downstream 224015 12837442 ~ 12841125 (-)
AMCG00001046 atf2,LOC107671311,LOC107739459 coding downstream 228655 12814441 ~ 12836485 (-)
AMCG00001043 chn1,LOC107657347,LOC107742958,LOC107739458 coding downstream 270092 12789335 ~ 12795048 (-)
AMCG00001059 NA coding upstream 143360 13213789 ~ 13224364 (-)
AMCG00001060 pde11a coding upstream 218584 13289013 ~ 13302989 (-)
AMCG00001066 NA coding upstream 364107 13434536 ~ 13441759 (-)
AMCG00001065 NA coding upstream 371622 13442051 ~ 13470870 (-)
AMCG00001064 NA coding upstream 402949 13473378 ~ 13486109 (-)
G128191 NA non-coding downstream 65264 12999582 ~ 12999876 (-)
G128155 NA non-coding downstream 255123 12764912 ~ 12810017 (-)
G128070 NA non-coding downstream 569925 12493178 ~ 12495215 (-)
G128045 NA non-coding downstream 677556 12358559 ~ 12387584 (-)
G127976 NA non-coding downstream 906657 12154508 ~ 12158483 (-)
G128237 hnrnpa3 non-coding upstream 136445 13206874 ~ 13211855 (-)
G128242 NA non-coding upstream 177460 13247889 ~ 13280730 (-)
G128322 NA non-coding upstream 526356 13596785 ~ 13597366 (-)
G128355 NA non-coding upstream 708803 13779232 ~ 13779656 (-)
G128358 NA non-coding upstream 713604 13784033 ~ 13785913 (-)
G128160 wipf1 other downstream 313624 12732184 ~ 12751516 (-)
AMCG00001039 NA other downstream 332539 12725694 ~ 12732601 (-)
AMCG00001041 cir1,si:ch73-167c12.2 other downstream 361230 12697177 ~ 12703910 (-)
AMCG00000960 NA other downstream 2364776 10696856 ~ 10700364 (-)
G127443 NA other downstream 2786929 10274687 ~ 10278211 (-)
AMCG00001061 cycsb,LOC108273362,LOC108430847,LOC107740584 other upstream 286554 13356983 ~ 13359770 (-)
AMCG00001068 LOC107576050 other upstream 697112 13767541 ~ 13773878 (-)
G128628 NA other upstream 1522270 14592699 ~ 14598570 (-)
G128741 NA other upstream 2108812 15179241 ~ 15180322 (-)
AMCG00001118 hibch other upstream 2293638 15364067 ~ 15433469 (-)

Expression


Co-expression Network