Gene
RNA
| Item | Value |
|---|---|
| gene id | G128322 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030137.1 |
| NCBI id | CM030137.1 |
| chromosome length | 27060302 |
| location | 13596785 ~ 13597366 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: tripartite motif-containing protein 35-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU160903 | True | 448 | lncRNA | 0.40 | 2 | 13596785 | 13597366 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00001064 | NA | coding | downstream | 110676 | 13473378 ~ 13486109 (-) |
| AMCG00001065 | NA | coding | downstream | 125915 | 13442051 ~ 13470870 (-) |
| AMCG00001066 | NA | coding | downstream | 155026 | 13434536 ~ 13441759 (-) |
| AMCG00001060 | pde11a | coding | downstream | 293796 | 13289013 ~ 13302989 (-) |
| AMCG00001059 | NA | coding | downstream | 372421 | 13213789 ~ 13224364 (-) |
| AMCG00001071 | frzb,LOC106582261,LOC106586471 | coding | upstream | 200238 | 13797604 ~ 13802479 (-) |
| AMCG00001072 | nckap1,LOC107739442,LOC107699024 | coding | upstream | 208847 | 13806213 ~ 13820006 (-) |
| AMCG00001073 | nckap1,LOC107676070 | coding | upstream | 222653 | 13820019 ~ 13844401 (-) |
| AMCG00001077 | NA | coding | upstream | 342345 | 13939711 ~ 13960043 (-) |
| AMCG00001076 | NA | coding | upstream | 365837 | 13963203 ~ 13981932 (-) |
| G128242 | NA | non-coding | downstream | 316055 | 13247889 ~ 13280730 (-) |
| G128237 | hnrnpa3 | non-coding | downstream | 384930 | 13206874 ~ 13211855 (-) |
| G128212 | NA | non-coding | downstream | 526356 | 13065140 ~ 13070429 (-) |
| G128191 | NA | non-coding | downstream | 596909 | 12999582 ~ 12999876 (-) |
| G128155 | NA | non-coding | downstream | 786768 | 12764912 ~ 12810017 (-) |
| G128355 | NA | non-coding | upstream | 181866 | 13779232 ~ 13779656 (-) |
| G128358 | NA | non-coding | upstream | 186667 | 13784033 ~ 13785913 (-) |
| G128395 | neurod1,ndf1 | non-coding | upstream | 408903 | 14006269 ~ 14008671 (-) |
| G128614 | NA | non-coding | upstream | 986923 | 14584289 ~ 14585054 (-) |
| G128624 | NA | non-coding | upstream | 991659 | 14589025 ~ 14602330 (-) |
| AMCG00001061 | cycsb,LOC108273362,LOC108430847,LOC107740584 | other | downstream | 237015 | 13356983 ~ 13359770 (-) |
| G128160 | wipf1 | other | downstream | 845269 | 12732184 ~ 12751516 (-) |
| AMCG00001039 | NA | other | downstream | 864184 | 12725694 ~ 12732601 (-) |
| AMCG00001041 | cir1,si:ch73-167c12.2 | other | downstream | 892875 | 12697177 ~ 12703910 (-) |
| AMCG00000960 | NA | other | downstream | 2896421 | 10696856 ~ 10700364 (-) |
| AMCG00001068 | LOC107576050 | other | upstream | 170175 | 13767541 ~ 13773878 (-) |
| G128628 | NA | other | upstream | 995333 | 14592699 ~ 14598570 (-) |
| G128741 | NA | other | upstream | 1581875 | 15179241 ~ 15180322 (-) |
| AMCG00001118 | hibch | other | upstream | 1766701 | 15364067 ~ 15433469 (-) |
| AMCG00001119 | ftcd | other | upstream | 1811804 | 15409170 ~ 15432330 (-) |
