G128358


Basic Information

Item Value
gene id G128358
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 13784033 ~ 13785913 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU160951
CCCCCTCCTCCACAAATCCCTCCTTTAGAAAGAAATTAGACATACAACAAATCTAACCGGTGACTTTATTACAGATGACAGTGAAAACATGACGAGGGGAGTATATTAAACATCTTTGGACATTTGcttgaaaacacagaaatgcaaaagTACTCTATTTGTGCAAAGCTATAACCCAAAGGACGAATAATTTATTCTTTTGGTtcctggaaaaacaaagcaaaactacTTTTCTTTGTTCGACCCACCCAATACAAATTGGCAGGGAGTTGCACAATCGCCTTTAGAGAAAAGGTTAAGCTATGTCATGTGGAGACGTATTAATGAATTCATAACTACACTGTAAACTCTTCAGTTAAACTGTTACTTGAATCAGAGATGGATATTTCAATTTTATAGACTGTCAATTAAACTGTcaagagaacaaaaaataaacacttgatTTAGAAGTTTTACATGACCTTACATATAAAACTTATTTGTGTACACTTCAGTATATTATTCCAATacttattaatacatttcactcAGTTTTAAACACTGGTCTTCACTGTAGCGTGTAATCTGGTTTTCTATTTAATCACGTGAACATAAGGATCTCCTAACAGTTTTTTCCGTAACAGTTCTCTCTGTACAACAACCGATGAAGCAAACTTAAGGTATGTAgagaaaacacaacattttgcaCTAATGTTTGTAATGAAACGTAATGGTCAAAAATGTTTCAGTGTTCACACGAAGCAATGAAATTGATTACAGACAGTATGTTTGAAGagtcaataatataaaaactaaataaataaacagaaatctAAAACGGTTTTGACCTTGCAaaggaaagtaaataaaacataaaaaaggacaCTGCCATACATTTAACAATGTAATGTGCGCTTCTCCTAAACGATCTAACAAAATATACTGCAGTAGTATTTATCACAGGTCcaaaaatgaaaaggcaatACAATGGCACGTCAGATTTGCTGACATGCCTCACAAATACAATCTTCCCATTCATTTCTGTTCAGTTAACGCTGTTGTCCTTGGTAGTGTCACGCGGAGTTGCTTATAGATACACCCGGAGTTACTTTAAAAGGCCatttaatacatacagtatacagaTCCGGCAGTGAAGTCTGCTTAACCCACATTTATTTCATGCCTAATTATGGTTATTTTTTCGGACAATGACGgagtattaaaaagaaagaaaggagttACTTTATGAGCCAGGTGTAGGACAGTGTGAACCTTTTCCCATCCCTCGCCAAGCGTAATGACAGTAAACAGTGCCACCACATCTCTGTCCAAGAGTCTCTTTTCAACAGCTGGAGTTCTTTCTTCTTTAATTTTGCTTCCAATTTGTCTTCGGGTTGTTGTAGTCAAAATTAAAGTTCATCCTTGATCGTAGAAGAGGGCCTGCTTTGTATCTGCTTTAATCGCTGGCTCAGAAGGTCACCTATGGCCTTTATATCATgactatttatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160951 True 1489 lncRNA 0.36 2 13784033 13785913

Neighbor

gene id symbol gene type direction distance location
AMCG00001069 NA coding downstream 90915 13518561 ~ 13693118 (-)
AMCG00001064 NA coding downstream 297924 13473378 ~ 13486109 (-)
AMCG00001065 NA coding downstream 313163 13442051 ~ 13470870 (-)
AMCG00001066 NA coding downstream 342274 13434536 ~ 13441759 (-)
AMCG00001060 pde11a coding downstream 481044 13289013 ~ 13302989 (-)
AMCG00001071 frzb,LOC106582261,LOC106586471 coding upstream 11691 13797604 ~ 13802479 (-)
AMCG00001072 nckap1,LOC107739442,LOC107699024 coding upstream 20300 13806213 ~ 13820006 (-)
AMCG00001073 nckap1,LOC107676070 coding upstream 34106 13820019 ~ 13844401 (-)
AMCG00001077 NA coding upstream 153798 13939711 ~ 13960043 (-)
AMCG00001076 NA coding upstream 177290 13963203 ~ 13981932 (-)
G128355 NA non-coding downstream 4377 13779232 ~ 13779656 (-)
G128322 NA non-coding downstream 186667 13596785 ~ 13597366 (-)
G128242 NA non-coding downstream 503303 13247889 ~ 13280730 (-)
G128237 hnrnpa3 non-coding downstream 572178 13206874 ~ 13211855 (-)
G128212 NA non-coding downstream 713604 13065140 ~ 13070429 (-)
G128395 neurod1,ndf1 non-coding upstream 220356 14006269 ~ 14008671 (-)
G128614 NA non-coding upstream 798376 14584289 ~ 14585054 (-)
G128624 NA non-coding upstream 803112 14589025 ~ 14602330 (-)
G128627 ttn.2,ttn,LOC108435065,LOC107601611,LOC107714399 non-coding upstream 804589 14590502 ~ 14592589 (-)
G128631 NA non-coding upstream 833659 14619572 ~ 14623133 (-)
AMCG00001068 LOC107576050 other downstream 10155 13767541 ~ 13773878 (-)
AMCG00001061 cycsb,LOC108273362,LOC108430847,LOC107740584 other downstream 424263 13356983 ~ 13359770 (-)
G128160 wipf1 other downstream 1032517 12732184 ~ 12751516 (-)
AMCG00001039 NA other downstream 1051432 12725694 ~ 12732601 (-)
AMCG00001041 cir1,si:ch73-167c12.2 other downstream 1080123 12697177 ~ 12703910 (-)
G128628 NA other upstream 806786 14592699 ~ 14598570 (-)
G128741 NA other upstream 1393328 15179241 ~ 15180322 (-)
AMCG00001118 hibch other upstream 1578154 15364067 ~ 15433469 (-)
AMCG00001119 ftcd other upstream 1623257 15409170 ~ 15432330 (-)
AMCG00001127 NA other upstream 1733703 15519616 ~ 15909126 (-)

Expression


Co-expression Network