G128402


Basic Information

Item Value
gene id G128402
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 14084286 ~ 14084930 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU161007
CCAGCTTTCATTCCCATGTGAGTGTAATAACACGGAATATCCAAATAAAGATCCGTTTGGTCCTTGGAAAGGTATAAACTTCTCCACATCCAAATTGTAACAGTCCACATGGCTAACCAAATACCAAACGCACGCTACACGCAGTGCATTGGACCAGCTATAAACTTTTTCCAACTTGTTCCGATccatatttgaaaacatgttttaaaagtggCATGCACCTAAAGCACTGACGGCTTAAAAAGCGTTGTactgaaaagcagaaaaaaagaagggAACGAGCTGATACATCCGTTTTTACATGACAAACAGTTACACTAGCTGTAAAAAAAGTTACAGTGCCTCTCTCCTGTTGCTTTCATCTGCTCTGATCTGCAACACTTCCAACTGTTTCAGTCCTGTCATGTGAAAAAGCGATTCCGTTAGGGGGAGCCTTTACATCCCTGCATACAGATGTGTCTTGCAAAAAGTAAAGGCAAGGCAAGTTCGCTCTCATTAGCATATATGAAGTTATACATTATGGAAACCAAGATGAAAAGTTGCAAATCACGTTTGGTATTAACCCTGGGCTGGTGTGAAAGTGAATGTAGAGGACTAGCTGGCACAGTTGTTCAAAAGCTCCTCTGGATGGGAGGCATGTGTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161007 True 645 lncRNA 0.42 1 14084286 14084930

Neighbor

gene id symbol gene type direction distance location
AMCG00001078 NA coding upstream 28508 14016104 ~ 14055778 (+)
AMCG00001079 neurod1,ndf1 coding upstream 76954 14006307 ~ 14007332 (+)
AMCG00001074 pde1a coding upstream 148446 13925452 ~ 13935840 (+)
AMCG00001075 NA coding upstream 235424 13846399 ~ 13848862 (+)
AMCG00001070 NA coding upstream 298429 13774575 ~ 13785857 (+)
AMCG00001082 cwc22,LOC107699014,LOC107676081,LOC107601622,LOC106586461 coding downstream 140800 14225730 ~ 14264053 (+)
AMCG00001085 znf385b,LOC107657507,LOC107699013,LOC107717003,LOC107601623 coding downstream 243370 14328300 ~ 14333025 (+)
AMCG00001083 znf385b coding downstream 258818 14343748 ~ 14351478 (+)
AMCG00001084 sestd1,LOC106582273,LOC107699012,LOC107657508,LOC106586460 coding downstream 287497 14372427 ~ 14399759 (+)
AMCG00001089 LOC107698997 coding downstream 319392 14404322 ~ 14473499 (+)
G128294 NA non-coding upstream 620804 13461666 ~ 13463482 (+)
G128255 NA non-coding upstream 701642 13357491 ~ 13382644 (+)
G128171 atp5g3,atp5g2,LOC101062993,LOC105908030 non-coding upstream 1243278 12837651 ~ 12841008 (+)
G128107 ola1,LOC107660044 non-coding upstream 1408112 12638985 ~ 12676174 (+)
G128101 NA non-coding upstream 1429114 12606039 ~ 12655172 (+)
G128662 NA non-coding downstream 688688 14773618 ~ 14776723 (+)
G128663 NA non-coding downstream 691929 14776859 ~ 14779441 (+)
G128697 NA non-coding downstream 986143 15071073 ~ 15073902 (+)
G128747 NA non-coding downstream 1125423 15210353 ~ 15211325 (+)
G128772 NA non-coding downstream 1241064 15325994 ~ 15326220 (+)
AMCG00001022 NA other upstream 1699244 12288950 ~ 12385042 (+)
AMCG00001002 myo3b other upstream 2072861 11999664 ~ 12011425 (+)
AMCG00000949 NA other upstream 3930099 10100283 ~ 10154187 (+)
G127134 NA other upstream 5464091 8617199 ~ 8620195 (+)
AMCG00000848 NA other upstream 8618305 5461301 ~ 5465981 (+)
AMCG00001098 NA other downstream 1065345 15150275 ~ 15184392 (+)
G128823 NA other downstream 1324182 15409112 ~ 15420880 (+)
AMCG00001114 NA other downstream 1375602 15460532 ~ 15463853 (+)
G129365 zgc:162707,LOC107749877,LOC107592986,LOC107668408,LOC107596553 other downstream 3938130 18023060 ~ 18044251 (+)
G129453 NA other downstream 4460963 18545893 ~ 18547915 (+)

Expression


Co-expression Network