G128614


Basic Information

Item Value
gene id G128614
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 14584289 ~ 14585054 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU161238
GTATTCATCATTGCATGTGACAGCTCCTGTTGATTCTGAGGGTATGCTGTGTACTCCAGCTGCATTCTTGGCAATGACGCGGAATTCATATACTTCTCCTTCACCCAGTGCTGTTACAGTGAAGGTAGTATCTGTCACTGTTGTGTAGTTACATTTCAGCCAGCGCCCCTCACCGGTATCGCTGTATGGCTTGCGTTCCACGATGTATCCCACAATCTTGCTTCCACCATCACTGAGTGGTACAGACCATTTCAATGATGCTATCATTGATCTGGATGCTTCACTAGCTTTGCTCAGTCCAGCGGCATTCATTGCATAGACTCTGAATTGGTACTCCAAGCCTTCCACAAGAGTGGATACTTTATAGTGGCAATCAAGGCATGGTATCTTGTTCTCTTTCACCCAAAGGATGGTGTTGCGTTCCTTCTTCTCTATCCAATATCCTGTAACCTTACTGCCACCATCATGGTATGGTTCCTCCCAACGAATGCCCATAGCATTAGCTGTGACAGAGAATACCTCAGGTCTTGTGGGAGAGCTTGGTGGaactgttaataaaaaataaaaaataaagaaagaaaatattaatattaaatatatatattaagtcaATC

Function

GO: NA

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption
ko04975 Fat digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU161238 True 614 lncRNA 0.43 2 14584289 14585054

Neighbor

gene id symbol gene type direction distance location
AMCG00001081 ub2e3,ube2e3 coding downstream 431431 14149024 ~ 14152858 (-)
AMCG00001080 NA coding downstream 499503 14054414 ~ 14084786 (-)
AMCG00001076 NA coding downstream 602357 13963203 ~ 13981932 (-)
AMCG00001077 NA coding downstream 624246 13939711 ~ 13960043 (-)
AMCG00001073 nckap1,LOC107676070 coding downstream 739888 13820019 ~ 13844401 (-)
AMCG00001092 LOC107691396,LOC107582034,LOC107556426 coding upstream 26632 14611686 ~ 14619008 (-)
AMCG00001093 dfnb59,LOC102786563 coding upstream 39371 14624425 ~ 14627710 (-)
AMCG00001091 NA coding upstream 147638 14732692 ~ 14761267 (-)
AMCG00001096 LOC105018745,LOC107657514 coding upstream 196152 14781206 ~ 14991380 (-)
AMCG00001097 NA coding upstream 410196 14995250 ~ 14998306 (-)
G128395 neurod1,ndf1 non-coding downstream 575618 14006269 ~ 14008671 (-)
G128358 NA non-coding downstream 798376 13784033 ~ 13785913 (-)
G128355 NA non-coding downstream 804633 13779232 ~ 13779656 (-)
G128322 NA non-coding downstream 986923 13596785 ~ 13597366 (-)
G128242 NA non-coding downstream 1303559 13247889 ~ 13280730 (-)
G128624 NA non-coding upstream 3971 14589025 ~ 14602330 (-)
G128627 ttn.2,ttn,LOC108435065,LOC107601611,LOC107714399 non-coding upstream 5448 14590502 ~ 14592589 (-)
G128631 NA non-coding upstream 34518 14619572 ~ 14623133 (-)
G128676 NA non-coding upstream 188508 14773562 ~ 14775639 (-)
G128681 NA non-coding upstream 371787 14956841 ~ 14957052 (-)
AMCG00001068 LOC107576050 other downstream 810411 13767541 ~ 13773878 (-)
AMCG00001061 cycsb,LOC108273362,LOC108430847,LOC107740584 other downstream 1224519 13356983 ~ 13359770 (-)
G128160 wipf1 other downstream 1832773 12732184 ~ 12751516 (-)
AMCG00001039 NA other downstream 1851688 12725694 ~ 12732601 (-)
AMCG00001041 cir1,si:ch73-167c12.2 other downstream 1880379 12697177 ~ 12703910 (-)
G128628 NA other upstream 7645 14592699 ~ 14598570 (-)
G128741 NA other upstream 594187 15179241 ~ 15180322 (-)
AMCG00001118 hibch other upstream 779013 15364067 ~ 15433469 (-)
AMCG00001119 ftcd other upstream 824116 15409170 ~ 15432330 (-)
AMCG00001127 NA other upstream 934562 15519616 ~ 15909126 (-)

Expression


Co-expression Network