G128747


Basic Information

Item Value
gene id G128747
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 15210353 ~ 15211325 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU161406
atttatttatattaaattttaAAACAGTACACAAAAGGCAGACCATGTACTTTTTGGTATAAAAcactcaacaaaacaaactgtaactTCCATGTAACTGAACCCCTGTAAATGGAGTATGTACATATGGTAGGCATGCATCCATGCACCCTCAAGTACAACATGTTTCACTTTGGATGATTACAGTAAACATagtgaaaatgaacagtgatgtAAACAAAGTCAGGTTTATTTCTCCCCTATAGTTTCGTATGACtcaatgtctgtgtttctgtttcctttctagtatgtacaaaatataaatgaccaGATTAAGAGCGTCAGCCTGTCTGGTGCTTTATTCTTCAAGACATTGTACCTTGTTTGCTGTCTActcagtaacattttaaaaaacaagtttgTGCAAGAGACTGTATTCAAAGTACAGTACAAAGGTTTccaaaaaactgtaaaattatattaactttaaaaatgttgaaaaaggaAAGCTGCTATTTCAGgatgtgcttttaatttatatCACTGTACTTCATTGTTATAACTTTTATaaatttggtttctttttaatatgAGAATAATAGGCAACACTGGGTGAACAAATATTGGCTATTCATTTGGTGTCTGGTTTTCAATATAAAGATGTTTGAAATATCTTGTCTGACAGAAATTGGTGATGTTTCGTATTTCTTTACTTCTAGTGAAACACGAGCGAGTGGGTGAAGATACATGGTTACATTTGTATaaccaaatacaaattatatgtatGACTTAATTATAGGCAATGTATAACACAGAGTGTaacccaataaaataaaaactattccagtggatttaattaaacataatctATACCCATGCTTATTTTGCTTCAGTTATGTtatcaaaaaatacatttagattaaGTAATATCAAgggtactgtgtgtgtgtatatacactcacctaaaggattattaggaacaccatactaatNN

Function

NR:

description
hypothetical protein EH28_23752

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161406 True 973 lncRNA 0.31 1 15210353 15211325

Neighbor

gene id symbol gene type direction distance location
AMCG00001094 calcrl,LOC103374150,LOC105905912,LOC104930425 coding upstream 139382 15061001 ~ 15070971 (+)
AMCG00001095 NA coding upstream 174772 14998017 ~ 15035581 (+)
AMCG00001087 LOC106581929,LOC108435067 coding upstream 482166 14696640 ~ 14728187 (+)
AMCG00001086 NA coding upstream 586502 14619523 ~ 14623851 (+)
AMCG00001088 NA coding upstream 608013 14522664 ~ 14602340 (+)
AMCG00001102 NA coding downstream 18546 15229871 ~ 15241090 (+)
AMCG00001101 NA coding downstream 50426 15261751 ~ 15264010 (+)
AMCG00001103 NA coding downstream 57927 15269252 ~ 15283103 (+)
AMCG00001108 NA coding downstream 83779 15295104 ~ 15318438 (+)
AMCG00001109 NA coding downstream 107625 15318950 ~ 15323639 (+)
G128697 NA non-coding upstream 136451 15071073 ~ 15073902 (+)
G128663 NA non-coding upstream 430912 14776859 ~ 14779441 (+)
G128662 NA non-coding upstream 433630 14773618 ~ 14776723 (+)
G128402 NA non-coding upstream 1125423 14084286 ~ 14084930 (+)
G128294 NA non-coding upstream 1746871 13461666 ~ 13463482 (+)
G128772 NA non-coding downstream 114669 15325994 ~ 15326220 (+)
G128815 NA non-coding downstream 147318 15358643 ~ 15359014 (+)
G128827 NA non-coding downstream 201455 15412780 ~ 15413107 (+)
G128919 NA non-coding downstream 355076 15566401 ~ 15886602 (+)
G128928 NA non-coding downstream 670030 15881355 ~ 15882299 (+)
AMCG00001098 NA other upstream 25961 15150275 ~ 15184392 (+)
AMCG00001022 NA other upstream 2825311 12288950 ~ 12385042 (+)
AMCG00001002 myo3b other upstream 3198928 11999664 ~ 12011425 (+)
AMCG00000949 NA other upstream 5056166 10100283 ~ 10154187 (+)
G127134 NA other upstream 6590158 8617199 ~ 8620195 (+)
G128823 NA other downstream 197787 15409112 ~ 15420880 (+)
AMCG00001114 NA other downstream 249207 15460532 ~ 15463853 (+)
G129365 zgc:162707,LOC107749877,LOC107592986,LOC107668408,LOC107596553 other downstream 2811735 18023060 ~ 18044251 (+)
G129453 NA other downstream 3334568 18545893 ~ 18547915 (+)
G129442 NA other downstream 3343826 18555151 ~ 18558174 (+)

Expression


Co-expression Network