G128827


Basic Information

Item Value
gene id G128827
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 15412780 ~ 15413107 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU161512
CTCCAAAATATTGCTACAAGAAACCATGGCACACAGAGGTACTTgccatatacatatataaagaaggAAGTTCAGGTAAATCAGTCACATTCTGTCTTCTCTCGTTTTAACTAGAATTAAGAACTGCAGGGGCCATTAACTTATGGGAGTagtttttatggttttattgtaAAAGACATTGTTTAAAATTACCTAGAATACATGCTGATCTTAATTGTTATACATATAGCctaaacataatacatacacacatatacatatacatatacatatacatatatatatatatatatttcag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161512 True 298 lncRNA 0.30 2 15412780 15413107

Neighbor

gene id symbol gene type direction distance location
AMCG00001112 NA coding upstream 61420 15351085 ~ 15351360 (+)
AMCG00001109 NA coding upstream 89141 15318950 ~ 15323639 (+)
AMCG00001108 NA coding upstream 94342 15295104 ~ 15318438 (+)
AMCG00001103 NA coding upstream 129677 15269252 ~ 15283103 (+)
AMCG00001101 NA coding upstream 148770 15261751 ~ 15264010 (+)
AMCG00001113 cnot9,LOC103363318,LOC106575212,LOC106574282,LOC105022524 coding downstream 62717 15475824 ~ 15481816 (+)
AMCG00001121 plcd4a,LOC107739328,LOC107600964,LOC106575211,LOC103363317 coding downstream 74046 15487153 ~ 15499125 (+)
AMCG00001122 LOC107673730,LOC107555925,LOC107714219,LOC107741911 coding downstream 98404 15511511 ~ 15518433 (+)
AMCG00001123 NA coding downstream 105366 15518473 ~ 15524200 (+)
AMCG00001120 NA coding downstream 112739 15525846 ~ 15529959 (+)
G128815 NA non-coding upstream 53766 15358643 ~ 15359014 (+)
G128772 NA non-coding upstream 86560 15325994 ~ 15326220 (+)
G128747 NA non-coding upstream 201455 15210353 ~ 15211325 (+)
G128697 NA non-coding upstream 338878 15071073 ~ 15073902 (+)
G128663 NA non-coding upstream 633339 14776859 ~ 14779441 (+)
G128919 NA non-coding downstream 153294 15566401 ~ 15886602 (+)
G128928 NA non-coding downstream 468248 15881355 ~ 15882299 (+)
G128938 NA non-coding downstream 508266 15921373 ~ 15921574 (+)
G128939 NA non-coding downstream 508567 15921674 ~ 15922039 (+)
G128941 NA non-coding downstream 509925 15923032 ~ 15924810 (+)
AMCG00001098 NA other upstream 228388 15150275 ~ 15184392 (+)
AMCG00001022 NA other upstream 3027738 12288950 ~ 12385042 (+)
AMCG00001002 myo3b other upstream 3401355 11999664 ~ 12011425 (+)
AMCG00000949 NA other upstream 5258593 10100283 ~ 10154187 (+)
G127134 NA other upstream 6792585 8617199 ~ 8620195 (+)
AMCG00001114 NA other downstream 47425 15460532 ~ 15463853 (+)
G129365 zgc:162707,LOC107749877,LOC107592986,LOC107668408,LOC107596553 other downstream 2609953 18023060 ~ 18044251 (+)
G129453 NA other downstream 3132786 18545893 ~ 18547915 (+)
G129442 NA other downstream 3142044 18555151 ~ 18558174 (+)
AMCG00001203 NA other downstream 3475177 18888284 ~ 18889724 (+)

Expression


Co-expression Network