G128939


Basic Information

Item Value
gene id G128939
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 15921674 ~ 15922039 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU161647
aCAGCACATtcgtttttctaggtctatggtgttgttaggatttactgacagatataattgtgtgtcgtctgcgtaactgtgaaagttaatattatgtcgtcgaatgatatcacctaaagggagcatgtataatgaaaaaagtataggtccgagaactgagccctgtgggactccgtacctaacctcagttaaatttgagtggttctcgttaatctgtacatattggagtctgtttgacagatatgatttaaaccatgaaagcACATTGCGAGATAGGCCAATACGGTTTTCTAAGCAGTGtaacaagattttgtggtcgattgtgtcaaaagccgcacttaagtctaataaaataataacactggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161647 True 366 lncRNA 0.38 1 15921674 15922039

Neighbor

gene id symbol gene type direction distance location
AMCG00001128 adarb1,adarb1b,LOC106581860,LOC106586125,LOC105907970 coding upstream 121517 15754698 ~ 15800157 (+)
AMCG00001125 NA coding upstream 276004 15630714 ~ 15645670 (+)
AMCG00001120 NA coding upstream 391715 15525846 ~ 15529959 (+)
AMCG00001123 NA coding upstream 397474 15518473 ~ 15524200 (+)
AMCG00001122 LOC107673730,LOC107555925,LOC107714219,LOC107741911 coding upstream 403241 15511511 ~ 15518433 (+)
AMCG00001129 traf3ip1 coding downstream 9687 15931726 ~ 15951003 (+)
AMCG00001130 asb1 coding downstream 31676 15953715 ~ 15958009 (+)
AMCG00001135 NA coding downstream 67133 15989172 ~ 16002152 (+)
AMCG00001134 twist2,LOC106586121 coding downstream 85966 16008005 ~ 16008487 (+)
AMCG00001138 NA coding downstream 354396 16276435 ~ 16285796 (+)
G128938 NA non-coding upstream 100 15921373 ~ 15921574 (+)
G128919 NA non-coding upstream 35072 15566401 ~ 15886602 (+)
G128928 NA non-coding upstream 39375 15881355 ~ 15882299 (+)
G128827 NA non-coding upstream 508567 15412780 ~ 15413107 (+)
G128815 NA non-coding upstream 562660 15358643 ~ 15359014 (+)
G128941 NA non-coding downstream 993 15923032 ~ 15924810 (+)
G128958 NA non-coding downstream 100219 16022258 ~ 16062179 (+)
G129071 NA non-coding downstream 967599 16889638 ~ 16892361 (+)
G129080 NA non-coding downstream 1222151 17144190 ~ 17147069 (+)
G129221 NA non-coding downstream 1565353 17487392 ~ 17550791 (+)
AMCG00001114 NA other upstream 457821 15460532 ~ 15463853 (+)
G128823 NA other upstream 500794 15409112 ~ 15420880 (+)
AMCG00001098 NA other upstream 737282 15150275 ~ 15184392 (+)
AMCG00001022 NA other upstream 3536632 12288950 ~ 12385042 (+)
AMCG00001002 myo3b other upstream 3910249 11999664 ~ 12011425 (+)
G129365 zgc:162707,LOC107749877,LOC107592986,LOC107668408,LOC107596553 other downstream 2101021 18023060 ~ 18044251 (+)
G129453 NA other downstream 2623854 18545893 ~ 18547915 (+)
G129442 NA other downstream 2633112 18555151 ~ 18558174 (+)
AMCG00001203 NA other downstream 2966245 18888284 ~ 18889724 (+)
G129594 bzw1a,LOC108414345,LOC105905677,LOC103358003 other downstream 3121265 19043304 ~ 19142145 (+)

Expression


Co-expression Network