G128958


Basic Information

Item Value
gene id G128958
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 16022258 ~ 16062179 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU161684
AGAAGAGGAAACGTGCAATTAActgatacttttttttatttacaccaCGAGAATAACAAGCTGTCATAATGTGGTACAAAATACTGGATTCCTAATAACTCTCTTGAAGATGCTGGAACTGTCAAAGAAAGACACCACTGGCCAGTTTGAAAAAGAAATCAGagaaaaggaaatcaaatatATCTGTTTAAGTCCACCAAGCAAACAAAGGACCAACAAGAAATAATATTAGAGCTAAAACAATGAATCCTACAATCACCAATACATAAGGTTCACATATGAACTAGTTGTtgtgaataaaaatacagaacaatagGATTTCTGGCAATGGTGACATTATTCTTGGAGAGTGCCTGGTGTGAAAAGGGTACAGTAGATTAAACTGCCAAAGTTacacattagtattgtgttttaaatgacacGTCTAAATTGTCTTTAAGACTGTATAAAAGGATGTGTTAGTGTATTAAACATACAGATGTTACAGATAAAAGTTGATAAACCCTTTGCAAATACCATAATGGGGTATGCAAACAttagcttaaaaaaatgtacaaagttTATAATATATGACTGGTTTAAGCTGCATACAAATTGGAGGGGGTATATGTTGTATATCTCTTATTGATGTTTTCTTAAATTCAGCATATTtgacagtattattatttgcaaaGTGTTCAAACGTCTTTccatgtttgtatatatatatatatatatatatatatatatatatatacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161684 True 740 lncRNA 0.31 2 16022258 16062179

Neighbor

gene id symbol gene type direction distance location
AMCG00001134 twist2,LOC106586121 coding upstream 13771 16008005 ~ 16008487 (+)
AMCG00001135 NA coding upstream 20106 15989172 ~ 16002152 (+)
AMCG00001130 asb1 coding upstream 64249 15953715 ~ 15958009 (+)
AMCG00001129 traf3ip1 coding upstream 71255 15931726 ~ 15951003 (+)
AMCG00001128 adarb1,adarb1b,LOC106581860,LOC106586125,LOC105907970 coding upstream 222101 15754698 ~ 15800157 (+)
AMCG00001138 NA coding downstream 214256 16276435 ~ 16285796 (+)
AMCG00001142 NA coding downstream 224261 16286440 ~ 16290299 (+)
AMCG00001139 NA coding downstream 244152 16306331 ~ 16311402 (+)
AMCG00001140 NA coding downstream 268690 16330869 ~ 16332913 (+)
AMCG00001141 NA coding downstream 284539 16346718 ~ 16354498 (+)
G128941 NA non-coding upstream 97448 15923032 ~ 15924810 (+)
G128939 NA non-coding upstream 100219 15921674 ~ 15922039 (+)
G128938 NA non-coding upstream 100684 15921373 ~ 15921574 (+)
G128919 NA non-coding upstream 135656 15566401 ~ 15886602 (+)
G128928 NA non-coding upstream 139959 15881355 ~ 15882299 (+)
G129071 NA non-coding downstream 827459 16889638 ~ 16892361 (+)
G129080 NA non-coding downstream 1082011 17144190 ~ 17147069 (+)
G129221 NA non-coding downstream 1425213 17487392 ~ 17550791 (+)
G129255 NA non-coding downstream 1629328 17691507 ~ 17692526 (+)
G129343 NA non-coding downstream 1909830 17972009 ~ 17976936 (+)
AMCG00001114 NA other upstream 558405 15460532 ~ 15463853 (+)
G128823 NA other upstream 601378 15409112 ~ 15420880 (+)
AMCG00001098 NA other upstream 837866 15150275 ~ 15184392 (+)
AMCG00001022 NA other upstream 3637216 12288950 ~ 12385042 (+)
AMCG00001002 myo3b other upstream 4010833 11999664 ~ 12011425 (+)
G129365 zgc:162707,LOC107749877,LOC107592986,LOC107668408,LOC107596553 other downstream 1960881 18023060 ~ 18044251 (+)
G129453 NA other downstream 2483714 18545893 ~ 18547915 (+)
G129442 NA other downstream 2492972 18555151 ~ 18558174 (+)
AMCG00001203 NA other downstream 2826105 18888284 ~ 18889724 (+)
G129594 bzw1a,LOC108414345,LOC105905677,LOC103358003 other downstream 2981125 19043304 ~ 19142145 (+)

Expression


Co-expression Network