Gene
RNA
| Item | Value |
|---|---|
| gene id | G129273 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030137.1 |
| NCBI id | CM030137.1 |
| chromosome length | 27060302 |
| location | 17710897 ~ 17761905 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0017001 | antibiotic catabolic process | biological_process |
| GO:0019541 | propionate metabolic process | biological_process |
| GO:0019543 | propionate catabolic process | biological_process |
| GO:0019626 | short-chain fatty acid catabolic process | biological_process |
| GO:0046459 | short-chain fatty acid metabolic process | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU162100 | True | 697 | lncRNA | 0.40 | 2 | 17710897 | 17712053 |
| TU162101 | False | 542 | lncRNA | 0.40 | 3 | 17710897 | 17761905 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00001166 | LOC103370188,LOC102799206,LOC101480403,LOC102206624,LOC102301787 | coding | downstream | 117036 | 17544583 ~ 17593861 (-) |
| AMCG00001163 | NA | coding | downstream | 173672 | 17523452 ~ 17537225 (-) |
| AMCG00001167 | ube2g2 | coding | downstream | 214762 | 17487397 ~ 17496135 (-) |
| AMCG00001164 | NA | coding | downstream | 223907 | 17440716 ~ 17486990 (-) |
| AMCG00001160 | NA | coding | downstream | 390368 | 17314065 ~ 17320529 (-) |
| AMCG00001176 | NA | coding | upstream | 44328 | 17806233 ~ 17856789 (-) |
| AMCG00001179 | tmem41a,LOC101174769 | coding | upstream | 215932 | 17977837 ~ 17989616 (-) |
| AMCG00001185 | vps8,LOC107699090,LOC107719737,LOC107710204 | coding | upstream | 411978 | 18173883 ~ 18236780 (-) |
| AMCG00001187 | NA | coding | upstream | 538928 | 18300833 ~ 18318933 (-) |
| AMCG00001194 | NA | coding | upstream | 745644 | 18507549 ~ 18517536 (-) |
| G129213 | NA | non-coding | downstream | 379216 | 17331460 ~ 17331681 (-) |
| G129125 | NA | non-coding | downstream | 715489 | 16923711 ~ 16995408 (-) |
| G129126 | NA | non-coding | downstream | 769615 | 16940667 ~ 16941282 (-) |
| G129065 | NA | non-coding | downstream | 830412 | 16876311 ~ 16880485 (-) |
| G129042 | NA | non-coding | downstream | 1136298 | 16520181 ~ 16574599 (-) |
| G129286 | NA | non-coding | upstream | 17011 | 17778916 ~ 17782649 (-) |
| G129358 | NA | non-coding | upstream | 210104 | 17972009 ~ 17976917 (-) |
| G129370 | NA | non-coding | upstream | 295235 | 18057140 ~ 18057666 (-) |
| G129394 | NA | non-coding | upstream | 478551 | 18240456 ~ 18265272 (-) |
| G129437 | NA | non-coding | upstream | 648201 | 18410106 ~ 18412750 (-) |
| AMCG00001165 | LOC100709166,LOC105019893,LOC103392195,LOC107668404 | other | downstream | 189627 | 17514386 ~ 17521270 (-) |
| AMCG00001156 | NA | other | downstream | 523267 | 17126359 ~ 17187630 (-) |
| AMCG00001127 | NA | other | downstream | 1801771 | 15519616 ~ 15909126 (-) |
| AMCG00001118 | hibch | other | downstream | 2277428 | 15364067 ~ 15433469 (-) |
| AMCG00001119 | ftcd | other | downstream | 2278567 | 15409170 ~ 15432330 (-) |
| AMCG00001193 | NA | other | upstream | 762828 | 18524733 ~ 18532689 (-) |
| AMCG00001196 | RPL37A,rpl37a,zgc:171772,rl37a,LOC107564751,LOC107567628 | other | upstream | 793330 | 18555235 ~ 18558217 (-) |
| G129566 | NA | other | upstream | 1126860 | 18888765 ~ 18889757 (-) |
| AMCG00001251 | NA | other | upstream | 3478577 | 21240482 ~ 21270383 (-) |
| AMCG00001264 | NA | other | upstream | 3845932 | 21607837 ~ 21648508 (-) |
