Gene
RNA
| Item | Value |
|---|---|
| gene id | G129566 |
| gene name | NA |
| gene type | unknown |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030137.1 |
| NCBI id | CM030137.1 |
| chromosome length | 27060302 |
| location | 18888765 ~ 18889757 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006091 | generation of precursor metabolites and energy | biological_process |
| GO:0042773 | ATP synthesis coupled electron transport | biological_process |
| GO:0006119 | oxidative phosphorylation | biological_process |
| GO:0022900 | electron transport chain | biological_process |
| GO:0008137 | NADH dehydrogenase (ubiquinone) activity | molecular_function |
| GO:0003954 | NADH dehydrogenase activity | molecular_function |
| GO:0016491 | oxidoreductase activity | molecular_function |
| GO:0050136 | NADH dehydrogenase (quinone) activity | molecular_function |
| GO:0016651 | oxidoreductase activity, acting on NAD(P)H | molecular_function |
| GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU162458 | True | 632 | TUCP | 0.49 | 2 | 18888765 | 18889757 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00001204 | fam126b | coding | downstream | 48375 | 18804707 ~ 18840390 (-) |
| AMCG00001206 | NA | coding | downstream | 94774 | 18791514 ~ 18793991 (-) |
| AMCG00001205 | orc2,LOC107564577 | coding | downstream | 99308 | 18786417 ~ 18789457 (-) |
| AMCG00001200 | NA | coding | downstream | 123997 | 18728264 ~ 18764768 (-) |
| AMCG00001201 | NA | coding | downstream | 172399 | 18642257 ~ 18716366 (-) |
| AMCG00001208 | NA | coding | upstream | 154200 | 19043957 ~ 19066500 (-) |
| AMCG00001211 | NA | coding | upstream | 210531 | 19100288 ~ 19105711 (-) |
| AMCG00001213 | NA | coding | upstream | 217797 | 19107554 ~ 19121606 (-) |
| AMCG00001215 | bzw1a,LOC108414345,LOC101480137 | coding | upstream | 250913 | 19140670 ~ 19151279 (-) |
| AMCG00001214 | NA | coding | upstream | 297742 | 19187499 ~ 19207758 (-) |
| G129465 | NA | non-coding | downstream | 407809 | 18477617 ~ 18480956 (-) |
| G129440 | NA | non-coding | downstream | 473655 | 18413485 ~ 18415110 (-) |
| G129438 | NA | non-coding | downstream | 475332 | 18412854 ~ 18413433 (-) |
| G129437 | NA | non-coding | downstream | 476015 | 18410106 ~ 18412750 (-) |
| G129394 | NA | non-coding | downstream | 623493 | 18240456 ~ 18265272 (-) |
| G129567 | NA | non-coding | upstream | 187 | 18889944 ~ 18890146 (-) |
| G129571 | NA | non-coding | upstream | 10754 | 18900511 ~ 18903646 (-) |
| G129573 | NA | non-coding | upstream | 17387 | 18907144 ~ 18907641 (-) |
| G129593 | dip2a,LOC108240767 | non-coding | upstream | 149410 | 19039167 ~ 19041958 (-) |
| G129621 | NA | non-coding | upstream | 186993 | 19076750 ~ 19083163 (-) |
| AMCG00001196 | RPL37A,rpl37a,zgc:171772,rl37a,LOC107564751,LOC107567628 | other | downstream | 330548 | 18555235 ~ 18558217 (-) |
| AMCG00001193 | NA | other | downstream | 356076 | 18524733 ~ 18532689 (-) |
| AMCG00001165 | LOC100709166,LOC105019893,LOC103392195,LOC107668404 | other | downstream | 1367495 | 17514386 ~ 17521270 (-) |
| AMCG00001156 | NA | other | downstream | 1701135 | 17126359 ~ 17187630 (-) |
| AMCG00001127 | NA | other | downstream | 2979639 | 15519616 ~ 15909126 (-) |
| AMCG00001251 | NA | other | upstream | 2350725 | 21240482 ~ 21270383 (-) |
| AMCG00001264 | NA | other | upstream | 2718080 | 21607837 ~ 21648508 (-) |
| G130004 | NA | other | upstream | 2899451 | 21789208 ~ 21822820 (-) |
| AMCG00001268 | NA | other | upstream | 3312289 | 22202046 ~ 22220416 (-) |
| AMCG00001270 | NA | other | upstream | 3369686 | 22259443 ~ 22302448 (-) |
