G129802


Basic Information

Item Value
gene id G129802
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 20789741 ~ 20791835 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU162751
TGATTGCACAAATCCTTTATTGTTCAGGATTAAATAGTACATGTTAACAAGCAGTCAAATGACATACAGACCAAACTgtatctgttttattgttttaacatcTACAAAAGCGTGttagcatattaaaataaatgtaaagtgattttcaaaacaacaactttttaaACATTGAGAAAACGTCATCTCTAAACATAAATCACTAAAACTCGCGATAGTGAGTTTCAACATTATggcacaatttgtatttattctttgaaTAGCTAAAGTGTCAAACCTCTTTGAAAACATGACATTGAAATGAAACACGGAACTGTAGGTAATAtacaatattgaattaaaaatgttccCTATAGACTTACTTATAGTGCTAGAGAATTGAGCTTGTTAAGAAGCagtgcttttttaaatagtgctttcaacaaatgtaataaaaatcacaaagtTTTATACTATTTACATACCTGTACTCTTTAAATTCTGTCTCTAATGATTGTCAAttgccttttgtattttttattttagcatttttattaatcatttaattagtcattttcatttagaaacatatctataaaaaaacataaaaataaacaaaaaaagatgtgAATCAGCAATCATGAAAACTCAAAATGGTCTTACTCATTTCATAGTACTGTAATTACAACTGTAGTAATAATGGTAAAAATCACTTCTCAGCACCtcaatgaggaaaataaatttcTTTCTCCTATGCTACATGCAGGACACATTCAGTATTGGATCTTTCCGGTAGAACCCCAGAGAATGTTACTTAatcatttcctttcatttggtTTTGGATTGGTGTAGTAAATTGAGTAAACGTCTGGTACATTACACTGTTGTGAATGTAAGCACTCAGATTCTCAGGcagtgtaaaaacacacacacacacacaaaaacacagattgcATTTGAAAGGCAAGACTCTTCTGACTAGTTCATGAAAATAGATGTTATGCACACCTTATGcacaattacatatttcagaagacaaatgtttcataataatacaaagtgtGCTGTGATTTTCTCCCCAAATCTCTTACCACATCACCACAATTTTAGTGGTGCTCGTCTTATAAGGTCTAAGAGAAACCCGGTTATACAGTACATcacatgaaaaaactaaacaaaaataaacatatgaaacaaatacagaCTTTAAGAAACAAGTCTGAATCCCCCACTCTTCTCCTTTCCTTGTTCAGTTCACTAATAAACAACTAAACTAAAcggattttgttttgcttttcttctcaGAAACATATTGCTAGCCATAGTCCTACTGCATTCATTAATCAATCATATTGAACAGTGCAATCAGATTAATTGGATGCCCCACTGTTTAATTGATTCTGTAAATGACCAGTTTTATtctacacaacaaacaaactactcGCGTGACTTTTCTAATGGGAAGTTTGCTTTGTCATAGTTCttcaaaataaactgtgttATTTACATCTATTGGACTGCCTTATATTAAGAGATTGATATCAGGAATTAAGCATCGTTAAGCAGTGGATTGGACtatgcacattttatttgcGTTATTGAACTGAACTTTCAACATCCACTGTCTTGGTTTTCttattgtttataaatatactgcaaaagcatttaaaaaaataaacttgtacttgtactttttatttatatgtgtatattctGTAATTTATAAATGAGAGTTCAGGAGTTTGGACATCCCCTATACACGTGCGTAGATTTCATTCTGGTCTAGACAAAGGAAATGATGACTTGACCATGCGGACAAGCCCATTCAAACTATGGCCCCCACTAGGcggaatgagccaaggagctgctgcaggggtGTTGTTTGGGGTGGAGAAGGGATGCAAAGCAGGGAATGCTGGGAATGTGCTTTTCTTGTCATAAACTCTGTCAGGTATGACAGTGGTCTTGCGCTCCTCCCGAAATTCGGTTTTATACTCCATTTATCcagtttatttcagaaaaaaaaatacatatatatatacaccgatcagccataacattatgaccagtgggtggaatatattaggcagcaagtgaacattttgtcctcaaagttgat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162751 True 2095 lncRNA 0.33 1 20789741 20791835

Neighbor

gene id symbol gene type direction distance location
AMCG00001231 NA coding downstream 207467 20568802 ~ 20582274 (-)
AMCG00001232 NA coding downstream 284917 20503852 ~ 20504824 (-)
AMCG00001233 NA coding downstream 333923 20454613 ~ 20455818 (-)
AMCG00001224 NA coding downstream 1296908 19491763 ~ 19492833 (-)
AMCG00001225 NA coding downstream 1311306 19477467 ~ 19478435 (-)
AMCG00001242 NA coding upstream 81791 20873626 ~ 20879379 (-)
AMCG00001247 NA coding upstream 215990 21007825 ~ 21021637 (-)
AMCG00001245 NA coding upstream 241223 21033058 ~ 21066211 (-)
AMCG00001246 LOC107593018,LOC107390280 coding upstream 336183 21128018 ~ 21154409 (-)
AMCG00001244 NA coding upstream 375137 21166972 ~ 21177803 (-)
G129757 NA non-coding downstream 192997 20596365 ~ 20596744 (-)
G129736 NA non-coding downstream 270811 20518444 ~ 20518930 (-)
G129722 NA non-coding downstream 366879 20422640 ~ 20422862 (-)
G129712 NA non-coding downstream 770776 20018697 ~ 20018965 (-)
G129707 NA non-coding downstream 851847 19937661 ~ 19937894 (-)
G129807 NA non-coding upstream 53861 20845696 ~ 20845939 (-)
G129844 LOC107575789 non-coding upstream 150222 20942057 ~ 20942449 (-)
G129878 NA non-coding upstream 285907 21077742 ~ 21078030 (-)
G129927 NA non-coding upstream 445639 21237474 ~ 21240024 (-)
G129951 NA non-coding upstream 541691 21333526 ~ 21333999 (-)
G129566 NA other downstream 1899984 18888765 ~ 18889757 (-)
AMCG00001196 RPL37A,rpl37a,zgc:171772,rl37a,LOC107564751,LOC107567628 other downstream 2231524 18555235 ~ 18558217 (-)
AMCG00001193 NA other downstream 2257052 18524733 ~ 18532689 (-)
AMCG00001165 LOC100709166,LOC105019893,LOC103392195,LOC107668404 other downstream 3268471 17514386 ~ 17521270 (-)
AMCG00001156 NA other downstream 3602111 17126359 ~ 17187630 (-)
AMCG00001251 NA other upstream 448647 21240482 ~ 21270383 (-)
AMCG00001264 NA other upstream 816002 21607837 ~ 21648508 (-)
G130004 NA other upstream 997373 21789208 ~ 21822820 (-)
AMCG00001268 NA other upstream 1410211 22202046 ~ 22220416 (-)
AMCG00001270 NA other upstream 1467608 22259443 ~ 22302448 (-)

Expression


Co-expression Network