G130004


Basic Information

Item Value
gene id G130004
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 21789208 ~ 21822820 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU162984
GAGGACCGAGTTTGAGTGCTGTGTGGAGGAGTTTGGGTCACTTTTGGTGAAAAACTGCAGAGTTTGTGGATTGTCTTGTTTAAAGGAGGAAAGCTATTTAAACCTCGGCGTGACACATCTAACCTGCAGGGGCCTGAGTGCACCCGGGGAAGAAAGGAAAGTCGATCTGTGAAAAAGGAGGAAGTGGAAATTGTGAACGGAGAGAAGGGAAAACTGGAAACTTAACTGCAGCACTATGGGCACCATCGCCCAAGTCTCAGGCCTTCACCCACACCCCGGACTCCATCGATGAGACCACGGTGTGTCCGGATGAAGTGGATCTGAGCCTCAGCGGGACATCGGACGGGTCCGCGGGGCTGCTGGACGCTTGCCGTTGTGGTTGTGTTGAACATTAGCGTGTTGTGGACATCACAAGcgcatatatacagacacaacaCCTCTTATGACTGCGAGCTATACATCAATAAGATCTTTAAAACAACACGCAATCCTCAAATACACCTAGTGAGGACAGTGTTTTTGAGTTGCGTAATATGGGTTTGAAATCAGAGGCGAATCTGCCGTGAAAACAACTCTGCTTCCGGTTTGGGGTTGATCCACGCGTTTCACTTATTGGATTGATCTGAAGGACACCTGTTGCTTCCTCCCCTGACATGAGCTGAGCAGGGAGCCGCGGTGATACACTGTACCCAGGGCTCTACACACAATTGGAAACCTGcacttttttttgggggggggcggAAATCTCCGAGTTTGCGAATGAAAATTAGCAGAAGATGAAAGTTACGGTCATTTTTGGGAAGACTGGCGTGGTTGTTCCCTGCAGAGATGGGTGGACAGTCAGAGATTTGATTCAACAAGCCACCCAGAGATACATGAAACTTCTAGAACAGGATGGCAGCTACTTTGTAAAGACCCATCACCTTGAGCACAGCGATGGAGGGATTCTGGACCCAGATGATGACCTGGCTGATCTTGTGGATGACAAGGATAAGGAGCTGGATTCCTATGATCCTTCTAAAGTATACTccataaataatgcaatatctTTGTTAATTAGTGTTAATATAAATTAGTGTATTAACGtcatatgaaaatgttaattgagTGAAGTCAGTTGAGGGGAATTTTAATGCGTCGGCTGTGTCAATTCTTAAAtttgaaatgctgaaaataTCCTTTTTTAAGGGTAGAAAAATTTACTtcctattttcctttttaagtaCTCTGATAATGtcatcattttttaattgtatttatttatgtaataaaggCTTTGAAAGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162984 True 1286 TUCP 0.44 4 21789208 21822820

Neighbor

gene id symbol gene type direction distance location
AMCG00001263 pard3bb,LOC107596552 coding downstream 77289 21707427 ~ 21711919 (-)
AMCG00001261 pard3bb,LOC107716778,LOC107688750 coding downstream 94237 21686709 ~ 21694971 (-)
AMCG00001258 NA coding downstream 235133 21553734 ~ 21554075 (-)
AMCG00001257 NA coding downstream 289532 21434440 ~ 21499676 (-)
AMCG00001256 nrp2b,LOC107688751,LOC107716756,LOC107596550 coding downstream 361902 21420733 ~ 21427306 (-)
AMCG00001262 NA coding upstream 130384 21953204 ~ 21960384 (-)
AMCG00001266 atic,pur9,LOC106575709 coding upstream 263171 22085991 ~ 22103093 (-)
AMCG00001267 NA coding upstream 313999 22136819 ~ 22143335 (-)
AMCG00001273 map3k2,LOC102792173,LOC107706666 coding upstream 648406 22471226 ~ 22497944 (-)
AMCG00001281 NA coding upstream 959071 22781891 ~ 22784507 (-)
G129951 NA non-coding downstream 455209 21333526 ~ 21333999 (-)
G129927 NA non-coding downstream 549184 21237474 ~ 21240024 (-)
G129878 NA non-coding downstream 711178 21077742 ~ 21078030 (-)
G129844 LOC107575789 non-coding downstream 846759 20942057 ~ 20942449 (-)
G129807 NA non-coding downstream 943269 20845696 ~ 20845939 (-)
G130033 NA non-coding upstream 178907 22001727 ~ 22084497 (-)
G130055 NA non-coding upstream 256262 22079082 ~ 22082918 (-)
G130101 NA non-coding upstream 410342 22233162 ~ 22233765 (-)
G130105 NA non-coding upstream 430931 22253751 ~ 22254154 (-)
G130215 NA non-coding upstream 680131 22502951 ~ 22515412 (-)
AMCG00001264 NA other downstream 140700 21607837 ~ 21648508 (-)
AMCG00001251 NA other downstream 518825 21240482 ~ 21270383 (-)
G129566 NA other downstream 2899451 18888765 ~ 18889757 (-)
AMCG00001196 RPL37A,rpl37a,zgc:171772,rl37a,LOC107564751,LOC107567628 other downstream 3230991 18555235 ~ 18558217 (-)
AMCG00001193 NA other downstream 3256519 18524733 ~ 18532689 (-)
AMCG00001268 NA other upstream 379226 22202046 ~ 22220416 (-)
AMCG00001270 NA other upstream 436623 22259443 ~ 22302448 (-)
AMCG00001274 NA other upstream 628766 22451586 ~ 22464876 (-)
G130244 NA other upstream 784322 22607142 ~ 22614286 (-)
AMCG00001291 NA other upstream 1687011 23509831 ~ 23555714 (-)

Expression


Co-expression Network