G130591


Basic Information

Item Value
gene id G130591
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 24330250 ~ 24354241 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU163667
TTTTGCAGTTGCACAACTccacaaacaaactttattcacatcaagatacaaaataaatatttttttaatagatttttttctacTTGTTTGCTACAAGAATACAGCAACACTAGATTTTTTAACAATCagaataattataacaatatagTTTAAATAATGCTTCTGTGTTGGGGGAAGCAGCATTTTCAACACATATTTTGGTAGAATGTAAAACCATGACAAACGACTAGGACAGTCACTGTATCAGCCCATTCCACCAGCTGTGTAATCCTGCACTCTACTATGTTAGGAATGCTTTGTAACCCCTTTTTCAAACTCATCCTAAATTTGTTTTGGACACCAACTCCCGTAGGATAATTGGGGGGGAAAGCATCCAAACACCCCTTATAAAACCTTACTGTGGTAAAGTAAAATGACAGTAAAGTGTAGGACAGCAAAGGGAAATCATGGTAAAGCATGAAGAGGTATAAGTAaaccatttattaatttgacattttaatccaAAGTGACTTACATGGGAACTAAGCTAAGAATTTAAAGCCATCAAAATACTCTAGATTGGATTGGGCTGACAATggtcatttgtttgtttgcagtgaCTTTGCTTAGAAAGACAAGATTACAGACGAACTGAGATGGTTGAAATGTATGGAGAAAACACATGTTCAGCCCGAGTTAGAATCGCCAATGTTAGGCAATAGACTTCCCCCTTTAAATATCTATGACTTGCACACAGGTGGTATAGTGCCTCACACAATGCCTGGCAAAGGTTTCAAATTGCAAGAAAAAGTGGGATGATAAATACAGACATCTTGTCTTAAGTTGGCAAGACAGCTTTCCGAAAAACTTCAAATAGCCAAGAGAAACTTGAGATCTTGGTGAATAGTTGGTTCAAAGGTTTAAAGTACACAATATTAGAAACCAAAGAGCTCCTTTTAGAACAGTGACAGCACTTAAAATGACAATGGTGGGGTAGGGGCCTGATTTGATCTGTCTTTAAAACTCAGATGGAAAGATACCTAgtagaatgaaaatgtaaggaTTCGGCCTACTAAGGTTCAACCATAAATGTCTGACATAGCCTGTCACTGTGGCCTCTTATTTAACAGTGACACCCCCCTCAAGAGTCTCAAATGATAATGGTACCTGAATGgaatacagaaaataagtaaaataatcaaattactACTTTTCTGAAAGGATCTGGTCACGgtcaattttatatataaaaatgtttcccACACTACTGCTGCTCAATCTTTACAACTGTCTTTTTGTTCAGTATGATGCAGTTGTTTCAGACATCTTTTCAGGGTTGGATACAAGGCTCCAACTACATTTAGCGAGGAAATAACCTTTTAAATATTCCTTTTTGTAGAATGTGGGGAGATGTGGACAGGGGTCTTGATCGATACCAATTAAACGACATTGGTGTAACACTTACAGTCACAAAAAAGAACATTGCCgctaatgcattttgtttaatatgccATTTTTATTCAcctatatataattatgatggATATTTCTCCATAGCTCATCGAGCACTGACTCATCCTAGTAAGTACTAGTAAAGATTCTGGGTGTACAGTTTGAGTTCATACAAGGAgtgtcattaattaaaatgttctgacataccaatttgtttgtttttaaagtaactCTACAGAAGATGAAACCCCatttgtcttaaatacactgcAGGTATGTCTGATCCTAGAATAGAAATGGCTGAATTCCTTGATAATTTCCTGATCATTTTACAATGGTTTGTAATAAAGCTCTGCTTGTGTGAAAATAAGACATTAACCTAGATTGCCAAATATAAAGGCAATGACGAATATGTTAATCACCCCAGTTGAATATCAATATCTTAAATATCAAGTCTACTCCTTtccaagaaaaaatattttaaaaatgttatattacaagatttttttTGTTTGACTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163667 True 1950 lncRNA 0.35 2 24330250 24354241

Neighbor

gene id symbol gene type direction distance location
AMCG00001296 NA coding downstream 188230 24114300 ~ 24142020 (-)
AMCG00001295 NA coding downstream 445562 23866621 ~ 23884688 (-)
AMCG00001293 eef1b2,eef1d coding downstream 709328 23616471 ~ 23620922 (-)
AMCG00001290 NA coding downstream 931269 23342817 ~ 23398981 (-)
AMCG00001289 NA coding downstream 1062299 23247525 ~ 23267951 (-)
AMCG00001301 NA coding upstream 848 24355089 ~ 24365595 (-)
AMCG00001304 NA coding upstream 20434 24374675 ~ 24375851 (-)
AMCG00001308 NA coding upstream 21663 24375904 ~ 24382811 (-)
AMCG00001307 LOC108255233,LOC107659949,LOC107714908 coding upstream 67906 24422147 ~ 24436699 (-)
AMCG00001305 tba1a coding upstream 85165 24439406 ~ 24471079 (-)
G130574 NA non-coding downstream 135846 24190999 ~ 24194404 (-)
G130528 NA non-coding downstream 413032 23916993 ~ 23917218 (-)
G130483 NA non-coding downstream 559387 23770409 ~ 23770863 (-)
G130482 NA non-coding downstream 579140 23745753 ~ 23751110 (-)
G130480 NA non-coding downstream 590990 23738979 ~ 23739260 (-)
G130633 NA non-coding upstream 222733 24576974 ~ 24578958 (-)
G130646 NA non-coding upstream 340567 24694808 ~ 24695031 (-)
G130671 NA non-coding upstream 560480 24914721 ~ 24914981 (-)
G130678 NA non-coding upstream 619638 24973879 ~ 24974084 (-)
G130686 NA non-coding upstream 670547 25024788 ~ 25025012 (-)
G130470 NA other downstream 604971 23723392 ~ 23725279 (-)
AMCG00001291 NA other downstream 774536 23509831 ~ 23555714 (-)
G130244 NA other downstream 1715964 22607142 ~ 22614286 (-)
AMCG00001274 NA other downstream 1865374 22451586 ~ 22464876 (-)
AMCG00001270 NA other downstream 2027802 22259443 ~ 22302448 (-)
AMCG00001306 NA other upstream 40285 24394526 ~ 24400546 (-)
AMCG00001303 NA other upstream 50546 24404787 ~ 24419606 (-)
G130622 si:ch211-114n24.6,tuba4a,LOC107387629,LOC107659949,LOC108255233,LOC107659977,LOC107678212 other upstream 80848 24435089 ~ 24439649 (-)
AMCG00001316 cfap65 other upstream 243328 24597569 ~ 24685570 (-)
G130667 LOC106958509,LOC106963510,LOC107690788,LOC107671222,LOC107579420 other upstream 472052 24826293 ~ 24836873 (-)

Expression


Co-expression Network