G130781


Basic Information

Item Value
gene id G130781
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 25449256 ~ 25451074 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU163905
TAATAGTGGAAGCACCACAGTTCAAAGTGGATTTTGATTTTGTGCATTTGAAGCTTCAACAATGGTGGTGCGTCCACCTGCAGCCTGTTAGATCTGTGGAATCCTGACATTTGGTTGAActctttcttatttatttgaaatggagagagaatgtgtgtgatTTGATCAGAcgcaaaaaaattatataaagatAAAAGGTCTGTTCAGTCGAATTCCTCAGGACGTGGTTTAATTTTATGCTTTTGTGAACAGGTGAAGCTCACAGGAAAAGGTCTTCAACCTAAATGCTCTACCATTCAGTCTATAGCATACAGACTGCATTCCCAATTCCCCGTTCACGTCTAACCAAGCCAGAGGCGCACAGCAATTACAAATAGCCTGTTCATGCACTACTTGTGTCTTAATGAGAAAGTGAACCTCAGCGAAGAATGCCAGAGCTAAATTAGCATACCATTTTAGGCATAATTACATCTGAAAGTTATTCTGTTGGTGTTAtaatattaaagttaaaatatgttaatatgtaatgtaaatctCAACTGAATTCCTGCAATGTCCCTGAACAATTATTGTGTACTTCATCtaacaataaacaaatccattataaacttttataatgtaatgcttacaaataacagaaaaacataaaattaaccAGGAATGAATGAACATAAAAAAATCTCAAGTTAATAAattagtatatatacatattatatatatatatatatatatatatatatatatatatacatatatatatacatacacacacacattttatatatatataaattagtgttacagctttaaatataaacaaactgtacatttgacattaatattaatacaagaGAAAATATGGCAGTTTATATACATCCTATCAATTTATGAAAGATTTTCCTTTAAGGGCTAATGGCTGTTAAAAACCATCACTTATCTGTTAGAATCCTCACTCTTTGCAATGCATCTGCAAAAGGAACTGAATTTTGTTCCACCTCCattctccttttttaaattaccaaTCAACACCAGTCACTCACTCAATGCCTAATGTTATCTTAAGCCTAAAATAACTACAGCATACTGGCCTTATAATTAGAATTTTCTACTAACAAAGGTAGCTGATCACACACTGCCAGGAAAACGTCCTGGTAtctttaatttgtgatttagtGCCACTCTGTCAGGGTATCTTAGagccattttaaatgatttcctCTTGACCTCGGTTTAAACTTCTTGGAGAGGCTGCAAAATATTAACAATTGCATTAATTACAACAGAGGAGATAAGCACAATGGGATACACCAATAAGGAAACTCCCTGGGTTACCCTTCCCGAGTGTTGAACAATATCAGCTTTTGTTCTTCCTTCATAAAAGCAAATTTAAATGTGtctggtcttttttttcccttcctttttcATGACTGGCTGAAAGACAATCGCAGCTCCTCCTCCCTCAGGGTCCTGTCCAATCGCAGCGTCTCGGCCTCCAGCACCGAGGGGAGTGTCTTCTGTGATACCAGGCTCAGCGAATCGGAGAGGTCCTGGCGCAGGGACAGCAACCACTGGCTGTTCCTGGAAGAGCGCTCGATGAACTCCGCTCTTTCTCGGAAGTCGACGGCCAACGTGAGCCGGAGATAGTGCACCTGCCGGTccaggagagaggaaagaaataaTCTGACTGATCATGTGGTTCCTACTGAGTTGCATGAATTGCAGTACAAAGCTCCTCATTGTGCACTTCCCCCTCAGAGCTCCCAAGTGCCATCGGTAGGGTATCTTTGCTGTCTATAAAAGTGTGGAGCACTACATAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163905 True 1819 lncRNA 0.38 1 25449256 25451074

Neighbor

gene id symbol gene type direction distance location
AMCG00001326 NA coding downstream 202606 25243645 ~ 25246650 (-)
AMCG00001323 NA coding downstream 225745 25219102 ~ 25223511 (-)
AMCG00001321 NA coding downstream 438641 24982581 ~ 25010615 (-)
AMCG00001320 NA coding downstream 583940 24806005 ~ 24865316 (-)
AMCG00001318 NA coding downstream 732200 24716537 ~ 24717056 (-)
AMCG00001336 NA coding upstream 126614 25577688 ~ 25584557 (-)
AMCG00001341 NA coding upstream 224494 25675568 ~ 25707676 (-)
AMCG00001340 wdr12,LOC107677607,LOC107706661 coding upstream 257777 25708851 ~ 25716069 (-)
AMCG00001339 nol5,nop58,LOC106575044,LOC107705548 coding upstream 276309 25727383 ~ 25734042 (-)
AMCG00001342 NA coding upstream 299268 25750342 ~ 25762406 (-)
G130778 NA non-coding downstream 8430 25437645 ~ 25440826 (-)
G130777 NA non-coding downstream 14137 25434916 ~ 25435119 (-)
G130775 NA non-coding downstream 17589 25431443 ~ 25431667 (-)
G130769 NA non-coding downstream 27912 25421029 ~ 25421344 (-)
G130764 NA non-coding downstream 65962 25379918 ~ 25383294 (-)
G130921 NA non-coding upstream 674737 26125811 ~ 26132592 (-)
G130944 NA non-coding upstream 837474 26288548 ~ 26293255 (-)
G130980 NA non-coding upstream 1036119 26487193 ~ 26487686 (-)
G131015 NA non-coding upstream 1179162 26630236 ~ 26630628 (-)
G131016 NA non-coding upstream 1204937 26656011 ~ 26656252 (-)
G130779 NA other downstream 6625 25441613 ~ 25442631 (-)
G130771 NA other downstream 25902 25421924 ~ 25423354 (-)
G130767 NA other downstream 35409 25389227 ~ 25413847 (-)
AMCG00001327 NA other downstream 169287 25275802 ~ 25279969 (-)
G130735 NA other downstream 202804 25222896 ~ 25246452 (-)

Expression


Co-expression Network