G131015



Basic Information


Item Value
gene id G131015
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 26630236 ~ 26630628 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU164183
agtgagagatagaataacaacaaaaaaatccagaaaaacgcatttcaaaaaagttataaattgatttgcatgttaatgagggaaataagtatttgaccccctatcaatcagcaagatttctggctcccaggtgtctcttaaagggagtgctcctaatcttagcttgttacctgtataaaagacacctgtccacagaagcaatcaatcaatcagattccaaactctccaccatggccaagaccaaggagctgtccaaggatgtcagggacaagattgtagacctacacaaggctggaatgggctacaagaccatcgccaagcagcttggtgagaaggtgacaacagttggtgcgattattcgcaaatggaagaaacacaaaataactgtcagtc

Function


GO: NA

KEGG:

id description
ko04913 Ovarian steroidogenesis

RNA


RNA id representative length rna type GC content exon number start site end site
TU164183 True 393 lncRNA 0.41 1 26630236 26630628

Neighbor


gene id symbol gene type direction distance location
AMCG00001359 NA coding downstream 93951 26529869 ~ 26536285 (-)
AMCG00001358 NA coding downstream 130240 26499293 ~ 26499996 (-)
AMCG00001354 NA coding downstream 269863 26299733 ~ 26360373 (-)
AMCG00001346 cdk15,LOC106575174,LOC106574248 coding downstream 637428 25959073 ~ 25992808 (-)
AMCG00001344 fzd7a,fzd7,LOC107751502,LOC107752890,LOC107668396 coding downstream 812716 25815838 ~ 25817520 (-)
AMCG00001362 NA coding upstream 179710 26810338 ~ 26829451 (-)
AMCG00001368 NA coding upstream 295069 26925697 ~ 26931563 (-)
AMCG00001366 NA coding upstream 351772 26982400 ~ 27004571 (-)
AMCG00001367 NA coding upstream 411169 27041797 ~ 27042274 (-)
AMCG00001369 NA coding upstream 411681 27042309 ~ 27049417 (-)
G130980 NA non-coding downstream 142550 26487193 ~ 26487686 (-)
G130944 NA non-coding downstream 336981 26288548 ~ 26293255 (-)
G130921 NA non-coding downstream 497644 26125811 ~ 26132592 (-)
G130781 NA non-coding downstream 1179162 25449256 ~ 25451074 (-)
G130778 NA non-coding downstream 1189410 25437645 ~ 25440826 (-)
G131016 NA non-coding upstream 25383 26656011 ~ 26656252 (-)
G131067 NA non-coding upstream 338250 26968878 ~ 26969197 (-)
G130779 NA other downstream 1187605 25441613 ~ 25442631 (-)
G130771 NA other downstream 1206882 25421924 ~ 25423354 (-)
G130767 NA other downstream 1216389 25389227 ~ 25413847 (-)
AMCG00001327 NA other downstream 1350267 25275802 ~ 25279969 (-)
G130735 NA other downstream 1383784 25222896 ~ 25246452 (-)

Expression



Co-expression Network