AMCG00001429


Basic Information

Item Value
gene id AMCG00001429
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 3986722 ~ 4013882 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001429
ATGTTGTCTGATCCCATTTTGAATAACAACctcctttcctttgtttgtCCCGTCTCTCAAACAGTGCTCCTCATCCAGGGGGCCTTGTACTTTACCAAGGAACCCAAGTCCCAGGATGCCTTGCACGGCCGGAGTGCCATGCTGCGCTGCGAGGTCAGTAACCCGACGGAAGTGCACTACACCTGGCTGCAAAATGGCGAGCTGGTCCAGGACAACGAGCGCCGCTTCCAAGAGGGCAGCAACCTCAAGTTCACTGCCGTGGACCGCCAGCTGGACTCTGGCAACTTCCAGTGTGTGGCCAGCAACCCAGCCGGAGCAGAGGAGGCCCGCTCCACTAACGCCTCCTTCAACATTAAGTGGTTAGAGAGTGGAGGGGTCACGCTGAAGGAACCAGCCTCCGAGGCGGAGATCGAGAGCTCTGTGCCAATCACGCTGCGCTGCCACATTGATGGACATCCACGCCCAACCTGCCAGTGGTTCAGAGATGGCACCAAGCTGACAGAGAAAACCCACCAAATCAATAACAAGGAGCGCACGCTGACCATTAAGAGCGCCAGCCCTGATGACAATGGCCTCTACTATTGTTGTGCCAAGAACGCAGCCGGTCAAGTCTGCAGCAACGCCAACTTCACGCTCAACATTATAGATAAGAGTTTTCCAAGGCCGGTGGTCAGCCCTGAGGACCAGGTGGTCAACAAGAACGAGGAGGCCGTGTTCCACTGCCAGTTCACCGCGGAGCCGATGCCCAAGGTGGAGTGGTACCACGAAAACGAGCTGGTCACCAACAAGTCCAGGGTGATGGTGTTCAGCAATGGCACCCTCGTGATCATGCAGGTTAAGGCCCGCCTCACCGGGCAGTACAAATGTGTGGCCAGAGCGCCGAAAGGAAACGCCGTGAACCTGCAGGCCACACTGAGAATCGCAGAAATCGAGGACATGCCTCCCTCGATGACCAGGGTCTTCACAGGGGACACCATGCAGAGGGTGAGATGCCAGGCCCCCCAAGGACACCCTAAGCCCGAGGTGTGGTGGGAGAAGCAGGGGGTCCGCATCCCTTCCAGCGGCCGAATATACCAGGATGGCTTCGACCTGGTCTTCAGTCCCATCGAAGGGGGAGACTCGGGCAACTACACCTGCGTGGCTGAGAACAAGGCCGGGGAGAAGAGGCAGGAGCTCAGCGTAACTGTGGCCACAATCCCAGAGTGGGTGACCAGGCCTGGGGACAGTCAACTGGAGGAGGGGAAGCCAGGCTTTCTGCACTGCCATGCCAGAGCCACCCCCGAGCCCGCTGTCACCTGGTACCGCAACAACATCGAGATCCAATTTGGGGATGGCCGCTTCACAAAGCTTCCTAACGGGACCCTGCGCATCAACAACGTGGAGGTGTATGATGGGACGCTGTACCGCTGTCTTTGCAGCACTGAGGCTGGCTACATCCAGGGCCAGGCCCGAGTGCATGTGCTCGAGAAGCTGAAGttcacccctcccccccaggcTGTGCAGTGCATGGAGCTGGATAGAGAAATCACCGTGGTATGCTCCGCCACGGGCCGAGAGACCCCTGTCATCCAGTGGGTCAAAGCAGATGGCACTGAGATCCCCCCTCGGGTGAATCAGAGGAGTGGCGTGTTGCACTTCACAAAGGTGACACGCAGCGACGCGGGCAACTACACCTGTGTGGCGTCCAACAGCCTGCAGGGGGAGATCCGGGCGGCAGTTTACATCAACGTGGCAGtgttCATCTTGTTCAAGCTGGAGCCAGAGAACACCACAGTGTACCAGGGCCACACTGCCATCCTGCACTGCCAGGCCACCGGAGATCCCGAGCCCTCCATACAGTGGATGATCAAAGACAAAGTCCTAGACCCCAGCAAACACAGGTTTCAGAAGATGCCGAACGGCTCCCTGATCATCACGGACGTCTCCACAGAGGACACGGGCAAATACACCTGCATAGCTGGGAACAGCTGTAACATCAGGTCCAGTGTGGCTCAGCTCTACGTTGTAGAAAAACCTGTGACCAAGCTGACCAACGATGGGGAGAAAGCGCCCTACAAGATGATCCAGACCATCGGGCTTTCGGTGGGGGCGGCGGTGGCCTACATCATCATCGTGCTGGGGCTCATGTTCTACTGCAAGAAGAGACGCAATGCCAAGAGGCTGCAGAAGACCGTGGAGGGGGAAGAGCCAGAGATGGAGTGTTTGAATGGCGGGACAGTCCAGCAAAATGGCCAGACGACAGCGGAGATCCAAGAAGAGGTGGCACTGACCAACCTGGGCACCACGGCCACCACCAACAAGCGGCATAGCACCAACGACAAGATGCACTTCCCCCGGGCCAACCTGCAGACAATTACCACACTGGGGAAGGGCGAGTTTGGGGAGGTGCTCCTGGCCAAGGCAAAGGGGCTGGAGGAGGGCGAAGGGGAGACGGTGGTCCTGGTGAAGAGCCTGCAGACCCGCGACGAGCAGCTGCAGCTGGACTTCCGCCGTGAGTTTGAGATGTTCGGCAAACTCAACCACGCCAACGTCGTGCGGCTCCTTGGCCTGTGCCGGGAGGCCGAGCCCCACTACATGATCCTGGAATACGTGGACCTGggGGATTTGAAGCAGTTCCTGAGAATCTCCAAAAGCAAAGATGAGAAAATCAAGCCTCAGCCGATCAGCACCAAACAAAAAGTGTCCATCTGCGCCCAGGTGGCATTGGGGATGGAGCACCTCTCCAACCATCGCTTCGTCCACAAAGACCTGGCTGCCCGCAACTGCCTGATCTCCGCCCAGCGGCAGGTCAAGGTTTCAGCCCTCAGCCTGAGCAAAGACGTCTACAACAGTGAGTACTACCACTACCGCCAGGCCTGGATCCCCCTGCGCTGGCTGCCTGCTGAGTCGGTGTTCGAGGACGACTTCTCCACCAAGTCTGACGTGTGGTCCTACGGGGTGCTGATATGGGAGGTGTTCTCACACGGGGAGCTGCCCCACAGCAAGCTGAGCGACGACGAGGTCCTGGCAGGTCTGCAGTCTGGGAAGATGAAGCTGCCCCTGCCAGAGGGCTGTCCCTCCAAAATCTATAAGCTGATGGTGCGCTGCTGGGCCCCCAGCCTCAAAGACCGGCCTTCGTTCAGCGAGATCGCAAACGCTCTGGGGGAGCTGCCCACGGACAGCAAAGTGTGA

Function

GO: NA

KEGG:

id description
K05127 PTK7, CCK4; PTK7 protein tyrosine kinase 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001429 True 3171 mRNA 0.59 19 3986722 4013882

Neighbor

gene id symbol gene type direction distance location
AMCG00001440 NA coding upstream 72166 3904477 ~ 3914556 (+)
AMCG00001441 NA coding upstream 91813 3888242 ~ 3894909 (+)
AMCG00001437 eif4a3,LOC107702040 coding upstream 214987 3766101 ~ 3771735 (+)
AMCG00001438 NA coding upstream 245323 3676483 ~ 3741399 (+)
AMCG00001439 NA coding upstream 337903 3608315 ~ 3648819 (+)
AMCG00001431 NA coding downstream 69156 4083038 ~ 4095370 (+)
AMCG00001432 ttbk1,LOC105907619 coding downstream 98188 4112070 ~ 4121193 (+)
AMCG00001435 NA coding downstream 122294 4136176 ~ 4153348 (+)
AMCG00001434 NA coding downstream 148791 4162673 ~ 4166553 (+)
AMCG00001446 NA coding downstream 164419 4178301 ~ 4204224 (+)
G157783 NA non-coding upstream 69649 3881842 ~ 3917073 (+)
G157668 NA non-coding upstream 493553 3489063 ~ 3493169 (+)
G157640 NA non-coding upstream 549059 3436345 ~ 3437663 (+)
G157635 NA non-coding upstream 580320 3405148 ~ 3406402 (+)
G157632 NA non-coding upstream 585467 3394245 ~ 3401255 (+)
G157834 NA non-coding downstream 53206 4067088 ~ 4067627 (+)
G157966 NA non-coding downstream 682672 4696554 ~ 4702861 (+)
G157975 NA non-coding downstream 700013 4713895 ~ 4714160 (+)
G157985 NA non-coding downstream 858813 4872695 ~ 4875144 (+)
G158014 NA non-coding downstream 874232 4888114 ~ 4888352 (+)
G157781 NA other upstream 105943 3875209 ~ 3880779 (+)
AMCG00001436 gng4 other upstream 221360 3748554 ~ 3765362 (+)
G157369 NA other upstream 1985794 1971881 ~ 2000928 (+)
AMCG00001392 NA other upstream 2291736 1691676 ~ 1694986 (+)
G157196 NA other upstream 3397422 587975 ~ 589300 (+)
AMCG00001433 NA other downstream 8915 4022797 ~ 4023910 (+)
AMCG00001430 srf other downstream 31474 4045356 ~ 4062333 (+)
AMCG00001457 NA other downstream 609585 4623467 ~ 4652000 (+)
AMCG00001480 NA other downstream 1352123 5366005 ~ 5383064 (+)
AMCG00001486 NA other downstream 1579798 5593680 ~ 5633349 (+)

Expression


Co-expression Network