AMCG00001431


Basic Information

Item Value
gene id AMCG00001431
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 4083038 ~ 4095370 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001431
GATGCCAGCCTACAATAACAGCTTGTTTTTTGCGGCTTTCTTCGTGTTGTATATTGTCATCAACACCTACATCTTCATGTACGTATTCCTGGCTGTTGTCTACaacaactacaagaaacatctgaagGAAGAAGTGAGACAAGTGGTGAGGGCGAAGAGAGACAAGATGGTGCGGGCCTTCGTGGTGCTGCAGGAGAGCCGGGGGGGGCAACCGGTCGTTGCGCAGGAGGACTGGAACCAGCTGGTCAAGATGGTGCAGCCGGACATCAGCACCTCCCACCGGCAGCTGCTGTGGAGCGTGTGCAATGAGGACAAGAATGGATACATAGGGAAAGCTGCCTTTGTACAGCTGGCTGACCTCCTTAACATCCAGGTTATCACCCTGAAGTCTCGCATCCACCCCCTGCAAATTAGATTTCCACGGCTTTACAGCTCGGCGGCTAGCAGGCTGATCTGCCGCCTGGTGCGGCACAAGGGGTTCATCTACATCTACGACCTGGTGATTCTGGTGAACGCTGTGTTCATCGGCCTGGACGAGGAGAACCCACTGATCTCCAACGCGGAGTGGGTGTTCCTGGGACTGTACTTGCTGGAGATCCTGCTGAAGCTGTACACCTATGAGCCGCGCTCATTTTTTGCCAGACATGAGTTTTGGAACTGGTTTGacaccatcatcatcatttctGCTTTAGTTGCCACCATCGCCAACTCCGCAATGAAATCATCTGGTGGCTACACCAGCCGTCAAATCCTGGATATAGTCTTTATCCTAAGGGTCCTGAGGCTTATTCGCATCGTGGACAGTATCAAGAGgtttCGGGCTATTATCAATACCATTATAAAGATTGGCCCCACGATTATTACTTTTGGACAGCTCATAATTGTGGTTTATTACATCTTTGCTGTGATTGGTATGGAATCGTTCAAGGGAAAAATCACATTCTACGGCTTCAACTCGTCGGACCCTGCCAGCGCGTACTGTGGCAACCCACTCCTGAAAGACTCTGCGTTTGCAAGACACAACTACTGCAAGAACAACTTCAATGACATTGTTTCCTCATTCATCCTTCTCTTGGAGCTCACTGTTGTGAACCACATTTTAGTCGCATTCATTCTGGAAGCTTTTTTTGTGGAGTATACGTTAGAAAAGTGTGATCTACAGACTTCAATTGAGAAGAAGATACAGGAGCTGGAATTGGGAATTGAGCAAGATGAGCAGGATAAGGGCATTGCGGAAGACATGGAAACTCAGGAGAATGACCTTGGCCCTGCAGAAAACGTCAAAGGAAAGTCTTCTCTCATGTTCAGGATTGCATCAAAAAGATACAAGACTGTGGATACCCTGTTACAGAGGATATTTGAGGCCGATCTGGGCCCTGAGGATAACGGCTGCAGTTTGGACGAGTGTGGAGAGGATCCTGACAATCCTTTGTCTCCAGGCTTCCAGAACCCAACCTTTGACAgcata

Function

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005216 ion channel activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001431 True 1468 mRNA 0.49 11 4083038 4095370

Neighbor

gene id symbol gene type direction distance location
AMCG00001429 NA coding upstream 69156 3986722 ~ 4013882 (+)
AMCG00001440 NA coding upstream 168482 3904477 ~ 3914556 (+)
AMCG00001441 NA coding upstream 188129 3888242 ~ 3894909 (+)
AMCG00001437 eif4a3,LOC107702040 coding upstream 311303 3766101 ~ 3771735 (+)
AMCG00001438 NA coding upstream 341639 3676483 ~ 3741399 (+)
AMCG00001432 ttbk1,LOC105907619 coding downstream 16700 4112070 ~ 4121193 (+)
AMCG00001435 NA coding downstream 40806 4136176 ~ 4153348 (+)
AMCG00001434 NA coding downstream 67303 4162673 ~ 4166553 (+)
AMCG00001446 NA coding downstream 82931 4178301 ~ 4204224 (+)
AMCG00001447 LOC104944420 coding downstream 135232 4230602 ~ 4242177 (+)
G157834 NA non-coding upstream 15411 4067088 ~ 4067627 (+)
G157783 NA non-coding upstream 165965 3881842 ~ 3917073 (+)
G157668 NA non-coding upstream 589869 3489063 ~ 3493169 (+)
G157640 NA non-coding upstream 645375 3436345 ~ 3437663 (+)
G157635 NA non-coding upstream 676636 3405148 ~ 3406402 (+)
G157966 NA non-coding downstream 601184 4696554 ~ 4702861 (+)
G157975 NA non-coding downstream 618525 4713895 ~ 4714160 (+)
G157985 NA non-coding downstream 777325 4872695 ~ 4875144 (+)
G158014 NA non-coding downstream 792744 4888114 ~ 4888352 (+)
G158089 NA non-coding downstream 1217698 5313068 ~ 5315236 (+)
AMCG00001430 srf other upstream 20705 4045356 ~ 4062333 (+)
AMCG00001433 NA other upstream 59128 4022797 ~ 4023910 (+)
G157781 NA other upstream 202259 3875209 ~ 3880779 (+)
AMCG00001436 gng4 other upstream 317676 3748554 ~ 3765362 (+)
G157369 NA other upstream 2082110 1971881 ~ 2000928 (+)
AMCG00001457 NA other downstream 528097 4623467 ~ 4652000 (+)
AMCG00001480 NA other downstream 1270635 5366005 ~ 5383064 (+)
AMCG00001486 NA other downstream 1498310 5593680 ~ 5633349 (+)
AMCG00001489 NA other downstream 1774605 5869975 ~ 5871430 (+)
AMCG00001493 NA other downstream 1794466 5889836 ~ 5900998 (+)

Expression


Co-expression Network