AMCG00001440


Basic Information

Item Value
gene id AMCG00001440
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 3904477 ~ 3914556 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001440
ATGATCCTGCTGGAAGCCGCTACTCGTCATGTGACTAGAGTGCGCTGGCTGTCAACAAAACCTGCGGGATCCCCGGGAATGGCACGCATCACATTCGAGGACCTCGCCGCGTTGGACGACGAACAgctggatgatgatgatgtcgCGCAGAACAATCCTGAGCCAATGGccgaggaggagcaggagagacTGTTTGCTCATTGGCAGGCTGTGGCCAGCACACACCAAGTATCCCTCCCACAAGagATGTCTGGTCCGATTCAGCAGATGACAAGACAAAACCAAGcacaagagcaagagcaagttCCTTATGTGCCGGTATCTCGGCATGAAAAGCTGGAGGAAGTGCAGTATGAGGAGAGGGTGTATCCAGCTGGAAAGTGGGCCTGTATCACCAAGGGAGAGGACATGTATGAGCAGAGCATTTCTATGGGCTTCATGAAACTCATGCGCTACATTTGCAAGGAGAATTCTGCAGGGCGCTACTTGGGAATGACCATTCCTGTCATGAATGAGATCCAGATGTTGCAGGATGGGAAGGGCTTCATGAAAGATATCTTGACCGCGTATTACCTTCCGGCAGAGTTCCAGGACGACCCCCCGGTGCCCACAGACTCTGAGATCGCCATTGTGCAGAGAGAGTCTATCCGAGTCCTCAGCAGGGTGTTCTACGGGACGACCACCGAGGAGACCATTTCCAGGCAGATCAGCTTGCTGTGGGAGCTGCTGGGGTCCACGGACGACTTCCACAGGGACGTCTACATGGTGGCAGTGTACCAGAACCCCGGTGTGCCCTGCCGGAGAAACGAGATCTGGTTTATCCGCCGCGACCCATAGAGGCCAGACAGGGCCCCAGATTGCACCTGAAACAAACTGGGCCCTGGGTTCCCTTGCACTATGTCTACCCTAACACAGATTTATTGCCTGTAtagacataaaaacaaaaatccaagaGTTCCCCATACCTGGTTTCCTTTGTGTGCCTAAATTGTCATTAGAATGTAGAGATCTGGTAGCTTGGAGATGCTTTTCCCTGacaatggggagagagagagagagagagagagagagagagagagagagagagagagagacacacacacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001440 True 1106 mRNA 0.53 6 3904477 3914556

Neighbor

gene id symbol gene type direction distance location
AMCG00001441 NA coding upstream 9568 3888242 ~ 3894909 (+)
AMCG00001437 eif4a3,LOC107702040 coding upstream 132742 3766101 ~ 3771735 (+)
AMCG00001438 NA coding upstream 163078 3676483 ~ 3741399 (+)
AMCG00001439 NA coding upstream 255658 3608315 ~ 3648819 (+)
AMCG00001421 ero1b coding upstream 317037 3564520 ~ 3587440 (+)
AMCG00001429 NA coding downstream 72166 3986722 ~ 4013882 (+)
AMCG00001431 NA coding downstream 168482 4083038 ~ 4095370 (+)
AMCG00001432 ttbk1,LOC105907619 coding downstream 197514 4112070 ~ 4121193 (+)
AMCG00001435 NA coding downstream 221620 4136176 ~ 4153348 (+)
AMCG00001434 NA coding downstream 248117 4162673 ~ 4166553 (+)
G157668 NA non-coding upstream 411308 3489063 ~ 3493169 (+)
G157640 NA non-coding upstream 466814 3436345 ~ 3437663 (+)
G157635 NA non-coding upstream 498075 3405148 ~ 3406402 (+)
G157632 NA non-coding upstream 503222 3394245 ~ 3401255 (+)
G157602 NA non-coding upstream 584544 3316486 ~ 3319933 (+)
G157834 NA non-coding downstream 152532 4067088 ~ 4067627 (+)
G157966 NA non-coding downstream 781998 4696554 ~ 4702861 (+)
G157975 NA non-coding downstream 799339 4713895 ~ 4714160 (+)
G157985 NA non-coding downstream 958139 4872695 ~ 4875144 (+)
G158014 NA non-coding downstream 973558 4888114 ~ 4888352 (+)
G157781 NA other upstream 23698 3875209 ~ 3880779 (+)
AMCG00001436 gng4 other upstream 139115 3748554 ~ 3765362 (+)
G157369 NA other upstream 1903549 1971881 ~ 2000928 (+)
AMCG00001392 NA other upstream 2209491 1691676 ~ 1694986 (+)
G157196 NA other upstream 3315177 587975 ~ 589300 (+)
AMCG00001433 NA other downstream 108241 4022797 ~ 4023910 (+)
AMCG00001430 srf other downstream 130800 4045356 ~ 4062333 (+)
AMCG00001457 NA other downstream 708911 4623467 ~ 4652000 (+)
AMCG00001480 NA other downstream 1451449 5366005 ~ 5383064 (+)
AMCG00001486 NA other downstream 1679124 5593680 ~ 5633349 (+)

Expression


Co-expression Network