AMCG00001459


Basic Information

Item Value
gene id AMCG00001459
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 4876148 ~ 4885603 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001459
ATGTCAGGGACAGGTATACCGGGGGGATCCCCAACCTCATCATTCAGGGGGTCGCCAGCCCTGCCACCTATTATCACTCCATCCAACAGAGACTTTCTGGACACCTTGTATGCATACATAGACTGTGAGAAGAAGAGGTTAGGATGTCCTGAGAAGGGGCCGGACGAGCAACGATATGTCATTTACAGCTTTGTGTTTGAGAAGGTCATCGAGCATGTCTCTGCATACAAGAGCGTGTTGAGCATCATCAAGAAAGAGTACGATGACTGCATTGCTGCCATAAAGAAGAGCCACAGAAATGCCAGGGTCCGGCAAAACCAGCTGAAGGTCATTGCTGCTGAGCCCACAACTCTCATGCACTACCAGAGAAGAGCCACCCAGCTTTGGGAGAGGACCGAGATCATTCAGACAAACTCGGCTGAACTGAGGGCTCAAATTGAGAAGCTCAGAGACTCAAGAAGAAGGAAAAGCCCCTCACCGAAGGAGGAGGGCCCAGAAGTCAAACCCATTGGCCACATTCCAGGCCTGACATTTGAGGAGTCAATCAGCCCAGAGGCTCTGACCGAGCACCTGGAGTTCCTGGGGGGGAAGCGCAGGGAGCTACAACACAAGAAGAGCAGCCACTACGTCCCGGCACAGGTGAAGGCTGACTTGGACCGCAAGATGAGCCGCACCCTGGAGCGCAGAGATGAGCTGGCAGAGCAGAACACAAGACTGCGGCTCAGATACAAGCAAATTAAGGTGCTGTCTGGGGCTGTGCTTTCCTGGGAGAAATCGGATAGAAAGACTCCCCTGTTGGAGTTTGTCTCACCAATACTCCAACAGGCCTCAGACGTGAAAGcCTGTGATTCTTACCAAAGCATCAATTCAGTTGGATTTGAAGACGATGATCCGAGCAAGATCAAAGCATCTGAACTCTTAGCAGACTACATGGAACGCTTCCTGGAGCTCTTCGATGGAGGGCAATATGAGGCAGCTGCTTTCCATGCAGCCCGGTCCCCTCATGGAGCACTGAGGAACATGGAGACTATGGAGAAGTTCAgagGGATCACTGCGTACGAGGGAGAGCGTCCCCCTCTGCTGATGTTCTTCCAAGCCCTGATGATCTCTGTGGACGCGGTGAAAAATCCCCCCGGCGATGCCTTGTCTGTGGAGGCCGTGCGGTGCACCCTGCAGCACGGCTGTGTGGAGCTGGTCACACATTGGGTCACTCAGCACAGGCTGACCTACTCCGAGGCTCTGGCGGATGTCATCTTTGAGCATGGGCAGAGGACACCCCAGATCTCCAACACCTGCCTGGCTCTGGCCCAGATGGTGTATAGTGAGTGTGCCGTCCACAGGAAGGCCGTGTTGTGCATGTGCAGGCGGGGCATGATCAGCGGGGCCTTGGAATTCATCTACCAGAGCAAGACGTTCACCCTGGATGACTGTCTGTCCCTGCTGAGGGGCTGTCCCGGCATGGTGCTCCTACAGGCTCTGACCCAGGAGTACAGGGGCCGGCCGGCAGTGCTGTCCGTGGGCCTGgcagccctctctctcctgtcctctGACAGCAAGGACTTCGCCCTCCAGCTGCTGGAAAGGGTCTATGCCCGTGGGCGAAGTGTCCTGGCGAAGACGATCTTGGAAGACCTCATCTGCTCTCCTGAGGGATGGAGTGAGATCGCAGCCCAGTGCCGGGAGAATAACCTCACTCAGCTGGCCCAGGACATCATCGGCATCCTGTCGGCCCAGGCTGGAGTGGTGCTGCTCGACCCCGGCTCTGAGGATGCCAGGCTCATGGAGCATGTGCTCCTGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001459 True 1800 mRNA 0.56 11 4876148 4885603

Neighbor

gene id symbol gene type direction distance location
AMCG00001462 NA coding upstream 5406 4869079 ~ 4870742 (+)
AMCG00001461 NA coding upstream 9264 4802172 ~ 4866884 (+)
AMCG00001463 NA coding upstream 96362 4770617 ~ 4779786 (+)
AMCG00001452 NA coding upstream 357020 4518304 ~ 4519128 (+)
AMCG00001453 NA coding upstream 358235 4512184 ~ 4517913 (+)
AMCG00001460 NA coding downstream 29248 4914851 ~ 4939823 (+)
AMCG00001470 NA coding downstream 363771 5249374 ~ 5250444 (+)
AMCG00001479 NA coding downstream 517622 5403225 ~ 5413536 (+)
AMCG00001478 NA coding downstream 580293 5465896 ~ 5468938 (+)
AMCG00001475 NA coding downstream 595681 5481284 ~ 5486455 (+)
G157985 NA non-coding upstream 1004 4872695 ~ 4875144 (+)
G157975 NA non-coding upstream 161988 4713895 ~ 4714160 (+)
G157966 NA non-coding upstream 173287 4696554 ~ 4702861 (+)
G157834 NA non-coding upstream 808521 4067088 ~ 4067627 (+)
G157783 NA non-coding upstream 959075 3881842 ~ 3917073 (+)
G158014 NA non-coding downstream 2511 4888114 ~ 4888352 (+)
G158089 NA non-coding downstream 427465 5313068 ~ 5315236 (+)
G158104 NA non-coding downstream 535868 5421471 ~ 5423092 (+)
G158184 NA non-coding downstream 822489 5708092 ~ 5734559 (+)
G158230 NA non-coding downstream 1006443 5892046 ~ 5892246 (+)
AMCG00001457 NA other upstream 224148 4623467 ~ 4652000 (+)
AMCG00001430 srf other upstream 813815 4045356 ~ 4062333 (+)
AMCG00001433 NA other upstream 852238 4022797 ~ 4023910 (+)
G157781 NA other upstream 995369 3875209 ~ 3880779 (+)
AMCG00001436 gng4 other upstream 1110786 3748554 ~ 3765362 (+)
AMCG00001480 NA other downstream 480402 5366005 ~ 5383064 (+)
AMCG00001486 NA other downstream 708077 5593680 ~ 5633349 (+)
AMCG00001489 NA other downstream 984372 5869975 ~ 5871430 (+)
AMCG00001493 NA other downstream 1004233 5889836 ~ 5900998 (+)
AMCG00001509 sf3b5 other downstream 1508500 6394103 ~ 6395960 (+)

Expression


Co-expression Network