AMCG00001462


Basic Information

Item Value
gene id AMCG00001462
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 4869079 ~ 4870742 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001462
ATGACTACAAGCAGCCCGGAGACAATTCACCAAGTGGTCCACGGAGCCAGGGACTCCATGATCTACTACCTTTCGATAGGCTGGGTTCTGGAACACACCACTTTGTACGCCATTATCCCCGACCCCCATCTTCTGAAGCTGCCAATTGCGAAACTGGAAGAGACTGTGCATGTGATCAGAAATATTCCTGCTGTTGAAGAGGCCACGATCTTGCATTTTATGACACAACAGGTATGCAAACTGTTCATCAGGCAAGATGTCAGCACATGGAACACCAAAGTGAGGAAGAACATACAGGAGAGCGGCTTCTACCAGAAGCATTCACTGGACAGTGAATTGCTGGCTGGATTCAGAGAATACCTCCAGAATGACAGAGGTGTTCCCAATTGCAAACAGGAGAGTATCCACTTCTTCATGGAATCCAAGCCTTCTCTAGAGTTCATCCAAGACATAGAGGAGTGCAGGTCATACTTTGTGCAGCAGGAGAAAAACGGACAGTCACACCAGATGGCAAAGAACTACATGAAGAACCTGGACCAGCTGACCGTTCTCTACTACCCGGAGGCCCTGCTGATGCTTCAACACCTGCAACATGCCAGTGTCATGAAGAACCTGACAGTAATCAGCCAAGAGGGTCAGATTGAGCGTTACATAATTCACCAGGACTGGACCAAGAACCGTGTCGAGGCGGAAGCTGTAGTCTCGGTGTGGGTGCCTGTGGCCGAGACCCTAACCTCATTCCAGAGCCCAGACATTTTGCAGAAAGTGAAGTCCCAGAAGTGGAGGGGACTACGGTTCAGTACAGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001462 True 807 mRNA 0.50 5 4869079 4870742

Neighbor

gene id symbol gene type direction distance location
AMCG00001461 NA coding upstream 2195 4802172 ~ 4866884 (+)
AMCG00001463 NA coding upstream 89293 4770617 ~ 4779786 (+)
AMCG00001452 NA coding upstream 349951 4518304 ~ 4519128 (+)
AMCG00001453 NA coding upstream 351166 4512184 ~ 4517913 (+)
AMCG00001450 NA coding upstream 358223 4500349 ~ 4510856 (+)
AMCG00001459 NA coding downstream 5406 4876148 ~ 4885603 (+)
AMCG00001460 NA coding downstream 44109 4914851 ~ 4939823 (+)
AMCG00001470 NA coding downstream 378632 5249374 ~ 5250444 (+)
AMCG00001479 NA coding downstream 532483 5403225 ~ 5413536 (+)
AMCG00001478 NA coding downstream 595154 5465896 ~ 5468938 (+)
G157975 NA non-coding upstream 154919 4713895 ~ 4714160 (+)
G157966 NA non-coding upstream 166218 4696554 ~ 4702861 (+)
G157834 NA non-coding upstream 801452 4067088 ~ 4067627 (+)
G157783 NA non-coding upstream 952006 3881842 ~ 3917073 (+)
G157668 NA non-coding upstream 1375910 3489063 ~ 3493169 (+)
G157985 NA non-coding downstream 1953 4872695 ~ 4875144 (+)
G158014 NA non-coding downstream 17372 4888114 ~ 4888352 (+)
G158089 NA non-coding downstream 442326 5313068 ~ 5315236 (+)
G158104 NA non-coding downstream 550729 5421471 ~ 5423092 (+)
G158184 NA non-coding downstream 837350 5708092 ~ 5734559 (+)
AMCG00001457 NA other upstream 217079 4623467 ~ 4652000 (+)
AMCG00001430 srf other upstream 806746 4045356 ~ 4062333 (+)
AMCG00001433 NA other upstream 845169 4022797 ~ 4023910 (+)
G157781 NA other upstream 988300 3875209 ~ 3880779 (+)
AMCG00001436 gng4 other upstream 1103717 3748554 ~ 3765362 (+)
AMCG00001480 NA other downstream 495263 5366005 ~ 5383064 (+)
AMCG00001486 NA other downstream 722938 5593680 ~ 5633349 (+)
AMCG00001489 NA other downstream 999233 5869975 ~ 5871430 (+)
AMCG00001493 NA other downstream 1019094 5889836 ~ 5900998 (+)
AMCG00001509 sf3b5 other downstream 1523361 6394103 ~ 6395960 (+)

Expression


Co-expression Network