AMCG00001528


Basic Information

Item Value
gene id AMCG00001528
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 6871764 ~ 6874095 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001528
ATGTCTTACGCCGCTGCAGTCTGGTTCGCTGTCCAGGACGAGGTGGACAGGGTGGACAGGGTGGACAGTCGCAGTAGCGCCCGGGCTGGTTTAGACAGACTCGACAGCGAGGTCCTGCTCCAGCACTTCCACTTCAGCAGACCCGCTATCCGCTTCATCGTGGACTGCGGGGTCGTCATGCCCGATCCAGAGATGCTCATCACCAGACAGAAGCTGATAAACACTCATTTCAACACTGCGTTGCAACAGTCACAAGAACCCTTTCAGGATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001528 True 273 mRNA 0.56 2 6871764 6874095

Neighbor

gene id symbol gene type direction distance location
AMCG00001522 NA coding upstream 8380 6861191 ~ 6863384 (+)
AMCG00001516 NA coding upstream 84744 6779662 ~ 6787020 (+)
AMCG00001519 actc1a,act2,zgc:86709,LOC105024319,LOC100534413 coding upstream 95078 6772496 ~ 6776686 (+)
AMCG00001518 NA coding upstream 100864 6753731 ~ 6770900 (+)
AMCG00001517 abcb10 coding upstream 118871 6743705 ~ 6752893 (+)
AMCG00001529 LOC107717858 coding downstream 63252 6937347 ~ 6943146 (+)
AMCG00001531 ppm1g,LOC107660231 coding downstream 126346 7000441 ~ 7010715 (+)
AMCG00001532 NA coding downstream 137810 7011905 ~ 7015337 (+)
AMCG00001541 NA coding downstream 142834 7016929 ~ 7020818 (+)
AMCG00001542 adss,LOC107666526,LOC107375820,LOC107733748 coding downstream 238557 7112652 ~ 7133015 (+)
G158435 NA non-coding upstream 82792 6787404 ~ 6788972 (+)
G158364 NA non-coding upstream 362134 6509294 ~ 6509630 (+)
G158342 NA non-coding upstream 449529 6422000 ~ 6422235 (+)
G158337 NA non-coding upstream 461207 6409021 ~ 6410557 (+)
G158332 NA non-coding upstream 473576 6396920 ~ 6398188 (+)
G158539 NA non-coding downstream 154092 7028187 ~ 7036066 (+)
G158548 NA non-coding downstream 181753 7055848 ~ 7056061 (+)
G158555 NA non-coding downstream 284155 7158250 ~ 7160609 (+)
G158571 NA non-coding downstream 295438 7169533 ~ 7169767 (+)
G158580 NA non-coding downstream 438049 7312144 ~ 7313758 (+)
AMCG00001509 sf3b5 other upstream 475804 6394103 ~ 6395960 (+)
AMCG00001493 NA other upstream 970766 5889836 ~ 5900998 (+)
AMCG00001489 NA other upstream 1000334 5869975 ~ 5871430 (+)
AMCG00001486 NA other upstream 1238415 5593680 ~ 5633349 (+)
AMCG00001480 NA other upstream 1488700 5366005 ~ 5383064 (+)
G158478 NA other downstream 673 6874768 ~ 6876578 (+)
G158537 NA other downstream 149293 7023388 ~ 7028141 (+)
AMCG00001550 NA other downstream 797219 7671314 ~ 7679783 (+)
G158672 NA other downstream 862420 7736515 ~ 7737890 (+)
G158676 NA other downstream 872586 7746681 ~ 7746980 (+)

Expression


Co-expression Network