AMCG00001536


Basic Information

Item Value
gene id AMCG00001536
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 7270418 ~ 7296604 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001536
ATGCCGGCCTTTGGCTGCCGCGAGCAGCAtttGGACTTGACTGCGAGGTCAGGGTTGGAGAGGGCGCTCCAGACAGAGTTTGGGAAGCGTGCGCTGTGGTTTTCGGTGTTGTCGGTGCCGGTGCGCTGCTCCCttgccctctctccctcagtgctGTACGCCAGCTGGGGAGAACAGACCAGGAGCGAGGCTGTCAGCGCTGGAGATAGTTGCCCGCTTGTGGCATTCACAGTGGGCTGGTGTCCTGAGTCGCAGAAACCACGGAAGCGGATGACAGGGCCGGGCAGCTGTTGTCACAACTTGTGCAAGCTGAGCGCCCCTGACGGGGTGCTGTACTCATCTGCGTGTGCGGACTCCTTCTCCCCCTACAGCCTCATCCATCTCGCTGCGGAAACCCAGCTTATCGCTGATGAAGTGGCCCACACGCTCACGGAAAGCAGAGTATTAAAAAACACGAGGCACCCGTTTCTAACTTCTTTGAAGTATTCTTTTCAAACTAAAGATCGATTGTGCTTCGTCATGGAGTATGTCAATGGGGGTGAGAGGCAAGATGAGCATCCGTCCACGATTGCCCAGTTCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001536 True 582 mRNA 0.57 8 7270418 7296604

Neighbor

gene id symbol gene type direction distance location
AMCG00001542 adss,LOC107666526,LOC107375820,LOC107733748 coding upstream 137403 7112652 ~ 7133015 (+)
AMCG00001541 NA coding upstream 249600 7016929 ~ 7020818 (+)
AMCG00001532 NA coding upstream 255081 7011905 ~ 7015337 (+)
AMCG00001531 ppm1g,LOC107660231 coding upstream 259703 7000441 ~ 7010715 (+)
AMCG00001529 LOC107717858 coding upstream 327272 6937347 ~ 6943146 (+)
AMCG00001535 akt3,LOC107747540,LOC105912451,LOC107666430,LOC107698756 coding downstream 3586 7300190 ~ 7305321 (+)
AMCG00001539 NA coding downstream 95469 7392073 ~ 7410053 (+)
AMCG00001540 NA coding downstream 125206 7421810 ~ 7452801 (+)
AMCG00001548 NA coding downstream 234342 7530946 ~ 7549993 (+)
AMCG00001559 LOC105902337 coding downstream 389780 7686384 ~ 7688398 (+)
G158571 NA non-coding upstream 100651 7169533 ~ 7169767 (+)
G158555 NA non-coding upstream 109809 7158250 ~ 7160609 (+)
G158548 NA non-coding upstream 214357 7055848 ~ 7056061 (+)
G158539 NA non-coding upstream 234352 7028187 ~ 7036066 (+)
G158435 NA non-coding upstream 481446 6787404 ~ 6788972 (+)
G158580 NA non-coding downstream 15540 7312144 ~ 7313758 (+)
G158621 NA non-coding downstream 278310 7574914 ~ 7575132 (+)
G158631 NA non-coding downstream 364980 7661584 ~ 7664572 (+)
G158667 NA non-coding downstream 430946 7727550 ~ 7728815 (+)
G158668 NA non-coding downstream 432949 7729553 ~ 7731701 (+)
G158537 NA other upstream 242277 7023388 ~ 7028141 (+)
G158478 NA other upstream 393840 6874768 ~ 6876578 (+)
AMCG00001509 sf3b5 other upstream 874458 6394103 ~ 6395960 (+)
AMCG00001493 NA other upstream 1369420 5889836 ~ 5900998 (+)
AMCG00001489 NA other upstream 1398988 5869975 ~ 5871430 (+)
AMCG00001550 NA other downstream 374710 7671314 ~ 7679783 (+)
G158672 NA other downstream 439911 7736515 ~ 7737890 (+)
G158676 NA other downstream 450077 7746681 ~ 7746980 (+)
G158725 kat14,LOC106584902 other downstream 636552 7933156 ~ 7933555 (+)
G158836 NA other downstream 862542 8159146 ~ 8161815 (+)

Expression


Co-expression Network