AMCG00001548


Basic Information

Item Value
gene id AMCG00001548
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 7530946 ~ 7549993 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001548
TCTCAGCAGAAATGCATTGTGGTCTTTGCCCTGGTGTGCTGTTTCGCCGTCCTGGTGGCTCTGATATTTTCTGCCGTGGACATCTGGGATCAGGACGAGGATGGTATTACTGAAGACAACTGTAACAAAAACTGTCGGATTGTGCTCGTGGAAAACATTCCAGAAGACCTATCGTATTCCTCCAATGGCACCATCCATCTCCCTTTGTCAGTGGGCCTGCACAACCTACTGGACTTGGCCAAAAAGACGGTGGAAATAGTGTCTTCTCACTGGGCACTGAGCTCTGGAGATCTGGAGCAGGGCCAGCATCTGTTTAAAAGACTACTTAATCTGAAAGCTcataaaattaatctgaaagtGGCTAGTGGGTTCAATGAGTCGAAGGATTTGAAGAGCCTTTCTGAACATGGTGCTGACGTACACTATTTGAACATGACTGCCTTGACAAAAGGTCACCTGCACTCATCTTTCTGGGTGGTGGACAAGAAGCACATGTACATTGGGAGTGCGAGCATGGACTGGCGGTCCCTGGCACAGATGAAAGAGCTTGGGGTTATTATCTACAACTGCAGCTGTCTGGTGTTGGACCTTCACAGAATATTCACGTTGTACTGGCAACTACAGTACAAAGCCTTCGTGCCGTCCATGTGGTCCAAGCGGGTTTTCGCTCTTTACAACAAGGAGAAAGCACTCTCGGTGATCCTGAATAACACCAAGGCCGACGTCTTCATCTCgAGCTCCCCTGATATCTTCTGCCCTAAAGACCGAACCAAAGATATTGATGCCATTTATCGAGTGATTTCAGACGCCAAGAGATTCATCTACATCTCTATTATGGACTACCTGCCTCTTATCAACAGGAACCCTCACAGATACTGGTCTCGTATTGACGGGATGCTCAGAGAGGCTCTGATCCTGAGACAAATTAAAGTGTGCCTCTTAATAAGCTGCTGGGGACAAACCCACCCTCTGACATTCAACTTTGTGTGGTCTCTGAAGACACTGTGCATGGAAATGGCCAACTGCAGCTTAGAAAATGCAGTGTTCAAGGGAAGCATTCTATGCGTTTCCCCGGTTGTGTCTTTCCAGAAGTTCTTCAGCCCCCGAGCACAAAAGAACGGCACCTTTTATGGAATCAACCGGAACAAATTCATGGTGACGGACAATGCACTTTATATCGGGAACTTTGACTGGGTGGGTAATGAGTTTGCATACAATGCAGGAGCTGGTCTGGTGATCCACCAAACACAGGGACAAGAAGACCAAAACAGCACCAACATCCTGCAGCAGATCAAGGCCGTGTTTGAGAGAGACTGGAACTCCCGGCACAGCAAAAGCTTACAATCGAACAAGATCCCGGAGTGCATTAAACAGAGAGTGAACCCGTCTGCCTGGCTGAGGACCCCATTCGACAGTACAGATGGCAAAGACAACTTGAACAGCTATCTGTAA

Function

GO: NA

KEGG:

id description
K16861 PLD5; inactive phospholipase D5

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001548 True 1452 mRNA 0.48 9 7530946 7549993

Neighbor

gene id symbol gene type direction distance location
AMCG00001540 NA coding upstream 78145 7421810 ~ 7452801 (+)
AMCG00001539 NA coding upstream 120893 7392073 ~ 7410053 (+)
AMCG00001535 akt3,LOC107747540,LOC105912451,LOC107666430,LOC107698756 coding upstream 225625 7300190 ~ 7305321 (+)
AMCG00001536 NA coding upstream 234342 7270418 ~ 7296604 (+)
AMCG00001542 adss,LOC107666526,LOC107375820,LOC107733748 coding upstream 397931 7112652 ~ 7133015 (+)
AMCG00001559 LOC105902337 coding downstream 136391 7686384 ~ 7688398 (+)
AMCG00001558 gtpbp2,LOC108263131,LOC107751133,LOC102796526 coding downstream 146295 7696288 ~ 7710825 (+)
AMCG00001560 NA coding downstream 168801 7718794 ~ 7720111 (+)
AMCG00001556 LOC104967701 coding downstream 224849 7774842 ~ 7792880 (+)
AMCG00001571 NA coding downstream 304151 7854144 ~ 7859415 (+)
G158580 NA non-coding upstream 217188 7312144 ~ 7313758 (+)
G158571 NA non-coding upstream 361179 7169533 ~ 7169767 (+)
G158555 NA non-coding upstream 370337 7158250 ~ 7160609 (+)
G158548 NA non-coding upstream 474885 7055848 ~ 7056061 (+)
G158539 NA non-coding upstream 494880 7028187 ~ 7036066 (+)
G158621 NA non-coding downstream 24921 7574914 ~ 7575132 (+)
G158631 NA non-coding downstream 111591 7661584 ~ 7664572 (+)
G158667 NA non-coding downstream 177557 7727550 ~ 7728815 (+)
G158668 NA non-coding downstream 179560 7729553 ~ 7731701 (+)
G158671 NA non-coding downstream 185283 7735276 ~ 7735610 (+)
G158537 NA other upstream 502805 7023388 ~ 7028141 (+)
G158478 NA other upstream 654368 6874768 ~ 6876578 (+)
AMCG00001509 sf3b5 other upstream 1134986 6394103 ~ 6395960 (+)
AMCG00001493 NA other upstream 1629948 5889836 ~ 5900998 (+)
AMCG00001489 NA other upstream 1659516 5869975 ~ 5871430 (+)
AMCG00001550 NA other downstream 121321 7671314 ~ 7679783 (+)
G158672 NA other downstream 186522 7736515 ~ 7737890 (+)
G158676 NA other downstream 196688 7746681 ~ 7746980 (+)
G158725 kat14,LOC106584902 other downstream 383163 7933156 ~ 7933555 (+)
G158836 NA other downstream 609153 8159146 ~ 8161815 (+)

Expression


Co-expression Network