XLOC_000592



Basic Information


Item Value
gene id XLOC_000592
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 46735728 ~ 46736116 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00003139
atttaaatagctctattctGAAAGATTTCATCAATTTAGATTGACTGGGGTGATAAAGTTTTTTCCATGCAGTTCACCTGCatgaaatatgtatattttgCATATCAATTTAcacattgtaatatataaacatgacaaagcaaaaataaaagttaaacaatTCTGTATGGTTTTTTGGAGATTCTAACAGTATTTAAGTACAAAAATttaacaatcaaacataaaatagcaTGGTCATCAtgttatacaataatataaaaataatatttaataatatctgtcttgtaatctttaata

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00003139 True 297 lncRNA 0.24 2 46735728 46736116

Neighbor


gene id symbol gene type direction distance location
XLOC_000591 NA coding upstream 8771 46719096 ~ 46726957 (+)
XLOC_000590 arl11 coding upstream 81200 46652615 ~ 46654528 (+)
XLOC_000589 cab39l coding upstream 118445 46598502 ~ 46617283 (+)
XLOC_000588 mcf2la coding upstream 141440 46493944 ~ 46594288 (+)
XLOC_000587 tubgcp3 coding upstream 283042 46404968 ~ 46452686 (+)
XLOC_000593 CU986305.1 coding downstream 91775 46827891 ~ 46845676 (+)
XLOC_000594 tmprss3b coding downstream 211894 46948010 ~ 46957351 (+)
XLOC_000595 NA coding downstream 223786 46959902 ~ 46964228 (+)
XLOC_000596 cryzl1 coding downstream 353385 47089501 ~ 47105214 (+)
XLOC_000597 NA coding downstream 417074 47153190 ~ 47155997 (+)
XLOC_000586 BX465849.1 non-coding upstream 334092 46400612 ~ 46401636 (+)
XLOC_000585 NA non-coding upstream 428178 46307015 ~ 46307550 (+)
XLOC_000584 NA non-coding upstream 463402 46263451 ~ 46272326 (+)
XLOC_000583 NA non-coding upstream 483904 46249979 ~ 46251824 (+)
XLOC_000602 NA non-coding downstream 717477 47453593 ~ 47459506 (+)
XLOC_000608 CR381623.1 non-coding downstream 1161153 47897269 ~ 47897385 (+)

Expression



Co-expression Network